Query= MSMg01no370_e01.b1 MSMg01no370_e01.b1 CHROMAT_FILE:
MSMg01no370_e01.b1 PHD_FILE: MSMg01no370_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:15 2005
(585 letters)
>mm_chrX_22135730_22136714
Length = 985
Score = 1091 bits (564), Expect = 0.0
Identities = 579/586 (98%), Gaps = 5/586 (0%)
Strand = Plus / Minus
Query: 5 gaattcactaagataagaatgatgtttcttgccagttctgttcaacataatggtgaaaat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gaattcactaagacaagaatgatgtttcttgccagttctgttcaacataatggtgaaaat 837
Query: 65 cttcctcagagcactgaggcaagagaaacaaaccaagccccatcaactcaaaatagccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 cttcctcagagcactgaggcaagagaaacaaaccaagccccatcaactcaaaatagccag 777
Query: 125 acgttaatctgaatgcaggactttactagaacaattttagaaacagaaaatgatttaatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 acgttaatctgaatgcaggactttactagaacaattttagaaacagaaaatgatttaatt 717
Query: 185 aaagctatagagtagaacaccagtatacatttatcactagtatttctgttatttt--cac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 716 aaagctatagagtagaacaccagtatacatttatcactagtatttctgttattttcacac 657
Query: 243 acacacacacacacacacacacacacacacacacacacacacacacacacaaacctgcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 acacacacacacacacacacacacacacacacacacacacacacacacacaaacctgcaa 597
Query: 303 aagaaactgggattttatttataaacaacaaactgaaaatgaagaataatagactcaagc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aagaaactgggattttatttataaacaacaaactgaaaatgaagaataatagactcaagc 537
Query: 363 aaagagacaaaatatcgaaatgctaaacaatattaaaacaccattttgggatagcatcgg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 536 aaagagacaaaatatcgaaatgctaaacaatattaaaacaccattttgggatagcattgg 477
Query: 423 aaatgtaattgaggaaaatacgtaataaaaaaaataaaaaa---aaaacaccaatgggac 479
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 476 aaatgtaattgaggaaaatacgtaataaaaaaaataaaaaaaataaaacaccaatgggac 417
Query: 480 aaatcacatagacaagcaaatagaaagatacccaatattcattggttgaaaacagtcata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaatcacatagacaagcaaatagaaagatacccaatattcattggttgaaaacagtcata 357
Query: 540 gaatcaagataacccttataatccttaaaaaaacctttctttaaga 585
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gaatcaagataacccttataatccttaaaaaaacctttctttaaga 311
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_e01.g1 MSMg01no370_e01.g1 CHROMAT_FILE:
MSMg01no370_e01.g1 PHD_FILE: MSMg01no370_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:15 2005
(458 letters)
>mm_chrX_21988806_21989663
Length = 858
Score = 870 bits (450), Expect = 0.0
Identities = 456/458 (99%)
Strand = Plus / Plus
Query: 1 attaaattatttttaactcagctcattattacactcagcttgacatctcagacagttgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaaattatttttaactcagctcattattacactcagcttgacatctcagacagttgct 260
Query: 61 aatttttaaccaatttaacaaaatgtcctttgttaggaattaagtagcaatgtttctaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttttaaccaatttaacaaaatgtcctttgttaggaattaagtagcaatgtttctaac 320
Query: 121 ttattatagctgaaataaaagtatttcagaaaagaaggtatatcacatatagaaacttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttattatagctgaaataaaagtatttcagaaaagaaggtatatcacatatagaaacttag 380
Query: 181 aaaattagaaagacccctcattagacaaatgtagaaacagaataattccttaatatcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaattagaaagacccctcattagacaaatgtagaaacagaataattccttaatatcata 440
Query: 241 attaaatgatcaaatatagtgaatgaacaatgaaccagtcatctataaaaaattagaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 attaaatgatcaaatatagtgaatgaacaatgaaccagtcatctataaagaattagaaaa 500
Query: 301 ctaccacaaggaattgtgctacaagttaaaaaatgaggaacgataaagacttattgttgg 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 ctaccacaaggaattgtgctacaagttaaaaaatgaggaatgataaagacttattgttgg 560
Query: 361 actttaaaaatcttatggtacagcccacagactagaagacatgaaaatactacagaaatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actttaaaaatcttatggtacagcccacagactagaagacatgaaaatactacagaaatt 620
Query: 421 aagtaggaaagctctcttagaatgactgttttacactg 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtaggaaagctctcttagaatgactgttttacactg 658
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
