Query= MSMg01no372_h04.b1 MSMg01no372_h04.b1 CHROMAT_FILE:
MSMg01no372_h04.b1 PHD_FILE: MSMg01no372_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:11 2005
(451 letters)
>mm_chrX_74922175_74923025
Length = 851
Score = 845 bits (437), Expect = 0.0
Identities = 445/449 (99%), Gaps = 4/449 (0%)
Strand = Plus / Plus
Query: 5 gaattcatttccttctc--gttaaccatctataaaatgggtaaaatataattcttggaaa 62
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttcc--ctcaagttaaccatctataaaatgggtaaaatataattcttggaaa 262
Query: 63 tgtctgagggcatctccattttcattgctaaaagaagcagcacttgggcacaatgtggtt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtctgagggcatctccattttcattgctaaaagaagcagcacttgggcacaatgtggtt 322
Query: 123 tttctctttaataaccctttgtttttccatagattgaatttattgcatgaatcctatgtg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttctctttaataaccctttgtttttccatagattgaatttattgcatgaatcctatgtg 382
Query: 183 tcagcctctaaaaacagtgtctccaggagccagtgtgggaagatatgtcaacacacttct 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcagcctctaaaaacagtgtctccaggagccagtgtgggaagatatgtcaacacacttct 442
Query: 243 cagaggagtgtaacatggagagctgaagcctccatggttgttgggaggctatgagagtgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cagaggagtgtaacatggagagctgaagcctccatggttgttgggaggctatgagagtgg 502
Query: 303 aagaaattctttaaggaactaactcttaactcagccaaaagaaagagtccaagtttgagg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagaaattctttaaggaactaactcttaactcagccaaaagaaagagtccaagtttgagg 562
Query: 363 ctggagagatggctcagcgattaagagcactgactgttctagaggtcctgagttcaattc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ctggagagatggctcagcgattaagagcactgactgttctagaggtcctgagttcaattc 622
Query: 423 ccagcaaccacatggtggctcacaaccat 451
|||||||||||||||||||||||||||||
Sbjct: 623 ccagcaaccacatggtggctcacaaccat 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_h04.g1 MSMg01no372_h04.g1 CHROMAT_FILE:
MSMg01no372_h04.g1 PHD_FILE: MSMg01no372_h04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:12 2005
(419 letters)
>mm_chrX_75091470_75092288
Length = 819
Score = 787 bits (407), Expect = 0.0
Identities = 416/419 (99%)
Strand = Plus / Minus
Query: 1 tctatgtacaccagactggacttgaactcacagagatctacctgcctctacctctcaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 tctatgtacaccagactggacttgaactcacagagatctacctgcctctacctctcaggt 579
Query: 61 gctgggttcaaaagtgtgtatcaccacaagcagtctttttatgtttttatttatttttgt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gctgggttcaaaagtgtgtaccaccacaagcagtctttttatgtttttatttatttttgt 519
Query: 121 ttttaattaattttttttagaatgatagtgaacctatcctactgaatcagtctgttatag 180
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 518 ttttaattaattttttttagaatgatagtgaacctatcctcctgaatcagtctgttatgg 459
Query: 181 attccaccatgcttgacttgatatttaacatacctaaaattatttaaaagagtagtagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 attccaccatgcttgacttgatatttaacatacctaaaattatttaaaagagtagtagtt 399
Query: 241 caaaatcaagtaggtgtatacactagaatgttgaagagataattttatttttaaatacgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 caaaatcaagtaggtgtatacactagaatgttgaagagataattttatttttaaatacgt 339
Query: 301 ttttaaactaaaacataattacatcatttcccccttccattttctccctccaatccttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttttaaactaaaacataattacatcatttcccccttccattttctccctccaatccttcc 279
Query: 361 catgttccctcctcccttggtctttttcaaatcctagactcctttttctttaattgttc 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 catgttccctcctcccttggtctttttcaaatcctagactcctttttctttaattgttc 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
