CTCACTATTTCGAGAGGATCCGCGGAATTCCAAAAATTTCTTGTAATATT
TACTTTAAACAATTCATACATTTACACCTCACAGCACTTCTTCATAACTG
TACTACCATTGCTGAGATCCTTCTTCTTCGTAAATGGTCCTTCTCTTATT
TTTATAATGGTTCTCCTTTTCTTTGTGTGTATATCTGGGAACATCTCATG
CAGGTGGTTGTATTGTACTAGTTGCTATATTTTTGTGATCACAAGGTCTA
AAGGACCACAATCTGGTCTTGATCTACTCATATAAGAGCATCTGACCCTG
AATTGCTCTTTTTCCTGAATCTACTTCTCCAGTTAAGGTTTCACAAACAC
TACTGTTGAAGTACTCTATCAAAATGGGAAAAAATGAAAATATTACACCG
TATCTTCATCTGTTTCTACCTGAGGTGATATATTCTCATCTTTGTCAAAT
GATGGGCTCTGTACTATATAGACAAAAAAAATGGAAACATAATATGCTAT
ATTAGTAAAAGGGGATAAAGTATTAATGATTTGAATTTCTCAGGAAATAC
TGCCCAGGTGAATTTTTGAAACAGCTTTTAGAAATGACATAATTACGTAC
ATGAAATCCGGCATAGGTATAGATGAGAAAGTAAGTTCCAAATTATAGGG
CTATTGAATATTTTTACCATATTATAGAAAAAATTCCCTAACTTAAGAAA
AAATGGTCATGAA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTACAAGATTACAAAAGAGGTCG
AATATAAATGACATAGTCTTTAGTTGAATTGACCTTTTATAAATAGAAAT
TTGACAAAAAATAATATTTACTCTATGGGTGCTTTCAAAAATAGAATGGT
TTGCATGGAACAAGTTAGTATTGGAAGGATTAGAAGTTCGAAGCTATCCT
TGGTTACATTCTAAGTTGGGGCCAGCCTAGGCTATATGACATCCTGTCTG
AAAATATGAAATTACTGGATCTAGTAGTTTATCTTTATGAATCCTCTACT
TTGGATACTGAATCATGAGCAATATCAGAAGTACAAGGTCTATCAGTACC
AGAAAGTATAAAAAGAATTTCCCCAAACAAAAATAATTTAAGAGTTATTT
TTAGGGGCATGATTATGTTGCCAGGGAATAAAAGCACTTTGAGTTTAGAG
TGGTCAGTAATGAGGAGTGAGTATTGCTCTTACACAGGACTCACATTGGT
TAGCTCACAGTCACCTTTACCTTGAGGTTCAGGAGGCCTCTGGCAACTGT
GGGCATGTGCATTTCCTTACATACATATGTACGTACGAACACTTACTCCT
TCTCCCTCTCTCCCTCTCTCACTCCTCTCCCCACTCCTCTTTGTACCCTC
CTTCCTTTTTACTTACATGGACTAGTT

Query= MSMg01no373_k09.b1 MSMg01no373_k09.b1 CHROMAT_FILE:
MSMg01no373_k09.b1 PHD_FILE: MSMg01no373_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:39 2005
         (564 letters)



>mm_chrX_53094237_53095209
          Length = 973

 Score =  373 bits (193), Expect = e-107
 Identities = 470/571 (82%), Gaps = 33/571 (5%)
 Strand = Plus / Minus

                                                                       
Query: 6   tatttactttaaacaattcatacatttacacctcacagcac-ttcttcataactgtacta 64
           |||||||||| ||||||||||| | ||||||| ||||| || |||||||||||| | |||
Sbjct: 764 tatttacttttaacaattcatataattacaccccacagtactttcttcataactctccta 705

                                                                       
Query: 65  c-cattgctgagatccttctt-cttc--gtaaatggtccttctcttatttttat-aatgg 119
           | | ||||||||| || |||| ||||  |   |||||||  ||||| ||||||| || | 
Sbjct: 704 ctc-ttgctgagacccgtcttccttccag---atggtccacctcttctttttatgaa-gt 650

                                                                       
Query: 120 ttctccttttctttgtgtgtatatctgggaacatctcatgcaggtggttgtattgtacta 179
           ||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||  ||
Sbjct: 649 ttctccttttctttgtgtgtatatctgggaagatctcatgcaggtggtcctattgtttta 590

                                                                       
Query: 180 gttgctatatttttgtgatcacaaggtctaaagg--accacaatctggtcttgatctact 237
           |||||||| | |||||||| ||||||||| ||||  ||||  | |||| |||||   |||
Sbjct: 589 gttgctatgtgtttgtgattacaaggtctcaaggtcacca--agctgggcttga---act 535

                                                                       
Query: 238 ca-tataagagca---tctgaccctgaattgctctttttcctgaatctacttctccagtt 293
           || ||||  |||    ||||||| |||||||||  | |||||||||||||||||||||| 
Sbjct: 534 caatatat-agctgtgtctgaccttgaattgctgatcttcctgaatctacttctccagta 476

                                                                       
Query: 294 aaggtttcacaaacactactgttgaagtactctatcaaaatgggaaaaaa---tgaaaat 350
           ||||  |||||||||||||| ||||||||| ||||  || ||  ||||||   |||||||
Sbjct: 475 aaggcatcacaaacactacttttgaagtacactattgaactgacaaaaaaaattgaaaat 416

                                                                       
Query: 351 attacaccgtatcttcatctgtttctacctgaggtgatatattctcatctttgtcaaatg 410
           ||||| || |||||||||||| |||||  ||||| || ||||||||||||||||||||||
Sbjct: 415 attaccccatatcttcatctgcttctatgtgaggcgacatattctcatctttgtcaaatg 356

                                                                       
Query: 411 atgggctctgtactatatagacaaaa-aaaatggaaacata-a---tatgctatattagt 465
            |||||||| |||| ||| ||||| | |||||||||||||| |   ||||||||||||||
Sbjct: 355 ctgggctctttactgtattgacaatagaaaatggaaacatataaagtatgctatattagt 296

                                                                       
Query: 466 aaaaggggataaagtattaat-gatttgaatttctcaggaaatactgcccaggtgaattt 524
           || ||   |||| ||| || | |||||| ||||| | ||||| |||||| | | || |||
Sbjct: 295 aatagttaataaggtacta-tcgatttgcatttccctggaaaaactgcctatgcgagttt 237

                                          
Query: 525 ttgaaacagcttttagaaatgacataattac 555
           |||||||||||||| ||||||| ||||||||
Sbjct: 236 ttgaaacagcttttggaaatgaaataattac 206


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 973
Length adjustment: 10
Effective length of query: 554
Effective length of database: 963
Effective search space:   533502
Effective search space used:   533502
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)