AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTGAGCCTGAAAACNTTTNNNNNNNTTTTNNNNNNTTTTTTTTTTT
NNNTTTTTTTTTNTNTTTTTTNNTTTTTTNNNNTTTTTTTTTAATNTANA
ATTTTTTTTTTTTTNCNCCCACCCCCCCCCCCCCCCTCTTTTTTTTTTTT
TGTTGTGGGGGGGGCGGGAGACCCCCCTTTTAATTCNCCTTCTTTTTTTT
AAAAAAAAAAAAAAAAAAACTTTCCTTGATGGCTTTTATATATTTTTTTG
TCCTATAAAAAAAAAAACCCCNCCAAAAAAAAAAAAGGGTTTTTTTTTTT
GGTGGGGGGGGGCGCCCAAAAAAAAAAAATTTTATAAAAAAAAAATATTT
TTTTTTTTTTGTGTGTGTGGGGGAGAAAAAAAAAAAAAATAATTGTTGTG
GGGGGGTTTTTTTTTTGTGGTGGGGGCTTTTTTTTTTTAAAAAAAAAAAA
AAAAAANAAAACCCACCCCCCCCCCCCCCACCCGCGATTTTTTTTTTTTT
TGAGGTGGGAAGAAAATTATTTTTTATAATAAAAAAAAAACAAAAAAAAA
AAAATATAAAAAAAAACCCTATCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CACCCACACACAACAAAATATTATAAAATGTTATTTAATATTGATGAAAG
ACCAAAGATANGGAACCCCCCCCCCCCCTCCACACCCTCAAAAAAAAAAA
AAAAAAAAAAAAAATTAAAACACCCCCCCCCCCCCCCCCCTCCCCTTAAT
AAATAAATAAAAAA

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCTGCTTCCAAAACTTCTGTCATTCCCAGAAG
ACAGCATTTCAGTCTTCTCTGTTTTTCAATTAGTATTAGTCAGTAGTCTC
TAGACTTATATAATGAATATATATATATATATATATATATATATATATAT
ATATATATATATATATAATCAATATACTTCAAAATAGTAGCAACATATTA
ATAACACTTCAAACATGGAGGACATGGTAGTTGTTTAGTTTTCAAGGTTG
GGTCTACTCAGCTCTCAGCAGTTGGAGTAGTCCCATAGTTGCTGGCTCAT
AGAGGTTAACAACTCAATAGTTGTTCAGTGTATAAGACTGGGTTCCACGG
CAGTATTGGTCCTCTGAAAACCTGGAGGGTTTCTGAGTTGCTTCCAGTTC
TCATCAGTGATGGACACTCTGTTTCTCATATCAGAGAAGAAATCAGTAGC
CTCAATAGCAATAGAATAAATTAATCCAATGCTGAGAGGGAATGCCCAAA
AAACAAAAACAAAACAAAAATAAAGTANAATAAATAAATAAATAAATAAA
TAAATAAATAAATAAATAAATAAATAAATAATAGATCTCCCTTTTCTGTG
CTCCTTTCGATCTACATTGCTACCAGAAGAAACTGGTTCCATATGGAGTG
AGTTTTCCCTATAAGACAATTATGAACATTTTTCCTTTTTTTTTTN

Query= MSMg01no376_d02.g1 MSMg01no376_d02.g1 CHROMAT_FILE:
MSMg01no376_d02.g1 PHD_FILE: MSMg01no376_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:02 2005
         (575 letters)



>mm_chrX_107486202_107487176
          Length = 975

 Score =  895 bits (463), Expect = 0.0
 Identities = 506/534 (94%), Gaps = 22/534 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgcttccaaaacttctgtcattcccagaagacagcatttcagtcttctctgtttttcaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ctgcttccaaaacttctgtcattcccagaagacagcatttcagtcttctctgtttttcaa 282

                                                                       
Query: 61  ttagtattagtcagtagtctctagacttatataatgaatatatatatatatatatatata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttagtattagtcagtagtctctagacttatataatgaatatatatatatatatatatata 342

                                                                       
Query: 121 tatatatatatatatatatatatatataatcaatatacttcaaaatagtagcaacatatt 180
           ||||                     | |||||||||||||||||||||||||||||||||
Sbjct: 343 tata---------------------a-aatcaatatacttcaaaatagtagcaacatatt 380

                                                                       
Query: 181 aataacacttcaaacatggaggacatggtagttgtttagttttcaaggttgggtctactc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataacacttcaaacatggaggacatggtagttgtttagttttcaaggttgggtctactc 440

                                                                       
Query: 241 agctctcagcagttggagtagtcccatagttgctggctcatagaggttaacaactcaata 300
           |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |
Sbjct: 441 agctctcagcagttggagtagtcccatagttgctggatcatagaggttaacaattcaaca 500

                                                                       
Query: 301 gttgttcagtgtataagactgggttccacggcagtattggtcctctgaaaacctggaggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttgttcagtgtataagactgggttccacggcagtattggtcctctgaaaacctggaggg 560

                                                                       
Query: 361 tttctgagttgcttccagttctcatcagtgatggacactctgtttctcatatcagagaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttctgagttgcttccagttctcatcagtgatggacactctgtttctcatatcagagaag 620

                                                                       
Query: 421 aaatcagtagcctcaatagcaatagaataaattaatccaatgctgagagggaatgcccaa 480
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaatcagtagtctcaatagcaatagaataaattaatccaatgctgagagggaatgcccaa 680

                                                                 
Query: 481 aaaacaaaaacaaaacaaaaataaagtanaataaataaataaataaataaataa 534
           |||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 681 aaaacaaaaacaaaacaaaaataaagtaaaataaataaacaaataaataaataa 734


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)