GGGGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCCTAGTTCATATAAGTAGTAAGTCATGTAAACTAGTAG
GGAATAGTTATGGAAATAGAGAGGAGAAGAGAGTGAGAGGTAACACTCAA
AATCGGACTTGAAACAAAAAATGTGATGTAGGAAATGCAAACTATATCTG
CTTTTAAGTGTCTATATTGCGATGCTATCGGTGCATGTGTGTATGAATTC
CTATCATCCGAGGTTTAAATATTCTTCATTAATACAAATATAAGTCACAT
ATCAAACAAGTACTAATGATCAGTAGAGAGATGATAAAATAAAACATCTT
GAGAGCAAGCTAAAAGCAAAGAGGATTATAAATGGACAATATGAACATTT
AACCTGTAAAAGGCTTGAAGAAAATTCTAGATGAATTTGTATGAAGGTAT
ATTTAAATAACTATGTTTTGTAAACAATAAACTACAAATATTGGCTGGGG
CATTTTGCAAACAAAGAATTATTTGAGTTTCACTTGACTTTTAGTGACTA
AAATATTCAGTTGTATTCTATATAGCATAATAATTTACATTTTTATTGTT
AGCAGCAGTGCATAAATTATTTTCTCGTCAAAAAGAAGTTTAGTAGTTTA
GTAGAAAGAAACAAGTATATTAGCAATTATATAAGTAAAATATTTAAACT

NNNNTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCCAGAATAAAATGTTAC
CATTATATGGATGATGTCCTTTTGGCAGCACCGACGGAGGAAATGCTGGA
TTTGGCATATAGTAAGACCACACAACAGCTACAAAAGGGAAGGCTTACAG
TAGCCCCTGAAAAGGTGCAGAAGGGCAAGGTCATCCATTATTTAGGAAGC
AAAATAACAGAAAGATATATAACTCCACAGAAGATTTAAATTAGAACTGA
TCATCCAAGGACTTTAAATGATTTTCAAAAGTTGCTAGGAGATATTCAAT
GGGTTAGGCCTTATTTGGGTCTAACAAATAAGCAATTGCAACCTCTTTAT
GACATCTTGCCAGGAGCGACAGCCCTAGATTCAGAGAGAGTTCTTACAGA
AGAAGGAAGGGAGTTAAAGTTAGTAGAGAAGGCTATTCAAATTGCTGCTT
TAAAGAGGAGAGAGGTTGACCTTCCTATATCATTATGTATTTTGCCATCA
GAAAATCAACCTATTGGAGCCCTTTGGCAAGGGACTCCTTTATTATGGAT
CCATCCTAAAATTTCCCCCGCCAAAGTGTTATCCTATTATCCTGTCTCTG
TTGCCCAATTGGCATTGCTGGATTTACAGCAATGCATGCAGCATTTTGGC
ACCCCTCCTGATGAAATATTGTACCATATGATA

Query= MSMg01no378_a02.b1 MSMg01no378_a02.b1 CHROMAT_FILE:
MSMg01no378_a02.b1 PHD_FILE: MSMg01no378_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:23 2005
         (620 letters)



>mm_chrX_119197550_119198573
          Length = 1024

 Score = 1133 bits (586), Expect = 0.0
 Identities = 610/620 (98%), Gaps = 4/620 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctagttcatataagtagtaagtcatgtaaactagtagggaatagttatggaaat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctagttcatataagtagtaagtcatgtaaactagtagggaatagttatggaaat 264

                                                                       
Query: 65  agagaggagaagagagtgagaggtaacactcaaaatcggacttgaaacaaaaaatgtgat 124
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 agagaggagaagagagtgagaggtaatactcaaaatcggacttgaaacaaaaaatgtgat 324

                                                                       
Query: 125 gtaggaaatgcaaactatatctgcttttaagtgtctatattgcgatgctatcggtgcatg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaggaaatgcaaactatatctgcttttaagtgtctatattgcgatgctatcggtgcatg 384

                                                                       
Query: 185 tgtgtatgaattcctatcatccgaggtttaaatattcttcattaatacaaatataagtca 244
           |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtgtatggattcccatcatctgaggtttaaatattcttcattaatacaaatataagtca 444

                                                                       
Query: 245 catatcaaacaagtactaatgatcagtagagagatgataaaataaaacatcttgagagca 304
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catatcaaataagtactaatgatcagtagagagatgataaaataaaacatcttgagagca 504

                                                                       
Query: 305 agctaaaagcaaagaggattataaatggacaatatgaacatttaacctgtaaaaggcttg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agctaaaagcaaagaggattataaatggacaatatgaacatttaacctgtaaaaggcttg 564

                                                                       
Query: 365 aagaaaattctagatgaatttgtatgaaggtatatttaaataactatgttttgtaaacaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaaaattctagatgaatttgtatgaaggtatatttaaataactatgttttgtaaacaa 624

                                                                       
Query: 425 taaactacaaatattggctggggcattttgcaaacaaagaa----ttatttgagtttcac 480
           |||||||||||||||||||||||||||||||||||||| ||    |||||||||||||||
Sbjct: 625 taaactacaaatattggctggggcattttgcaaacaaataaaaaattatttgagtttcac 684

                                                                       
Query: 481 ttgacttttagtgactaaaatattcagttgtattctatatagcataataatttacatttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgacttttagtgactaaaatattcagttgtattctatatagcataataatttacatttt 744

                                                                       
Query: 541 tattgttagcagcagtgcataaattattttctcgtcaaaaagaagtttagtagtttagta 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tattgttagcagcagtgcataaattattttctcgtcaaaaagaagtttagtagtttagta 804

                               
Query: 601 gaaagaaacaagtatattag 620
           ||||||||||||||||||||
Sbjct: 805 gaaagaaacaagtatattag 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1024
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1014
Effective search space:   618540
Effective search space used:   618540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)