Query= MSMg01no381_j17.b1 MSMg01no381_j17.b1 CHROMAT_FILE:
MSMg01no381_j17.b1 PHD_FILE: MSMg01no381_j17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:04 2005
(445 letters)
>mm_chrX_165739239_165740082
Length = 844
Score = 804 bits (416), Expect = 0.0
Identities = 434/440 (98%), Gaps = 1/440 (0%)
Strand = Plus / Plus
Query: 6 gaattcttggggttacgacacacatttactgtatattaattctgtttctcagaaacgtgt 65
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcttggggtcatgacacacatttactgtatattaattctgtttctcagaaacgtgt 265
Query: 66 tatagaaagagcacttttggtctatctccaatccaacaaatttcttgaagaacacatcca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tatagaaagagcacttttggtctatctccaatccaacaaatttcttgaagaacacatcca 325
Query: 126 aatagtattgttttgcctctagtaaaccttgaatactatattttatgccaaagaaatgta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aatagtattgttttgcctctagtaaaccttgaatactatattttatgccaaagaaatgta 385
Query: 186 atgatatttattggtttcattcttaacgatctctgttgtgaacccctttatgctgtcttt 245
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 386 atgatatttattggtttcattcttaacgatctctgttgtgaacccctttat-ctgtcttt 444
Query: 246 cctagaaatgtcagaggagcctttcaatatctggttaacttggcattcaacattaaaaag 305
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 cctagaaatgtcagaggagcctttcaatatctggggaacttggcattcaacattaaaaag 504
Query: 306 tggatccaaagacccaggaatgacaggtgaaatgccatttttaaaattatttgccttacc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tggatccaaagacccaggaatgacaggtgaaatgccatttttaaaattatttgccttacc 564
Query: 366 tttaaaaacgtattttccctctctcttccttgctgttgtataaggtagctgcttgtcaac 425
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttaaaaacatattttccctctctcttccttgctgttgtataaggtagctgcttgtcaac 624
Query: 426 cattgttcagaaaagactga 445
||||||||||||||||||||
Sbjct: 625 cattgttcagaaaagactga 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 844
Length adjustment: 10
Effective length of query: 435
Effective length of database: 834
Effective search space: 362790
Effective search space used: 362790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_j17.g1 MSMg01no381_j17.g1 CHROMAT_FILE:
MSMg01no381_j17.g1 PHD_FILE: MSMg01no381_j17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:04 2005
(406 letters)
>mm_chrX_165903709_165904513
Length = 805
Score = 770 bits (398), Expect = 0.0
Identities = 404/406 (99%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 1 caccccaccccaccccaaacactattaagaaaataaagcatgcccaaatgtatactgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 caccccaccccaccccaaacactattaagaaaataaagcatgcccaaatgtatactgtag 546
Query: 61 aagactatttggttaaagttgtagcaatataaagaacaaaactgaatattaaaaaaaaat 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 545 aagactatttggttaaagttgtagcaatataaagaacaaaactgaatatt-aaaaaaaat 487
Query: 121 tgagaaaggtcatgtgatgaacaatgaaggtacttagataaaaggaagagttaaatgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgagaaaggtcatgtgatgaacaatgaaggtacttagataaaaggaagagttaaatgttt 427
Query: 181 aatattcaagatattaagtataacaacattttaaaatcaaaactacgcgcattaagatag 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 426 aatattcaagatattaagtataacaacattttaaaatcaaaactatgcgcattaagatag 367
Query: 241 gatttttaataacacaactataatatcagataactccaataaaaattatgaaatgcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 gatttttaataacacaactataatatcagataactccaataaaaattatgaaatgcaaat 307
Query: 301 atcaggtgtgcatggaatacattaaaacaaaaagttcatgatttcatattccatggaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atcaggtgtgcatggaatacattaaaacaaaaagttcatgatttcatattccatggaatt 247
Query: 361 tatctgtataactgacaagtagcgatgcataagcaacacatgtttt 406
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tatctgtataactgacaagtagcgatgcataagcaacacatgtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 805
Length adjustment: 9
Effective length of query: 397
Effective length of database: 796
Effective search space: 316012
Effective search space used: 316012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
