Query= MSMg01no385_j03.b1 MSMg01no385_j03.b1 CHROMAT_FILE:
MSMg01no385_j03.b1 PHD_FILE: MSMg01no385_j03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:10 2005
(543 letters)
>mm_chrX_72530824_72531767
Length = 944
Score = 998 bits (516), Expect = 0.0
Identities = 534/540 (98%), Gaps = 1/540 (0%)
Strand = Plus / Minus
Query: 5 gaattcaagaaatc-ctcatttcttaaaagaaaccaaaataaataacccttctttagcca 63
|||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gaattcaagaaagcaataatttcttaaaagaaaccaaaataaataacccttctttagcca 685
Query: 64 ttctaccatggaatatgttcatagatcaaggaaaatttacctccccagggaaaagtaaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttctaccatggaatatgttcatagatcaaggaaaatttacctccccagggaaaagtaaca 625
Query: 124 caaactcagtcacatataagaaacgtgagaacattattttcttgaaaccaactttgcctg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaactcagtcacatataagaaacgtgagaacattattttcttgaaaccaactttgcctg 565
Query: 184 aagaatctggcaaaattgaattgcttcctcaagtttccattcaagaggaagaaattttac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aagaatctggcaaaattgaattgcttcctcaagtttccattcaagaggaagaaattttac 505
Query: 244 ctacagaaactagccatggatctcctggacacttgaatctcatgaaagaggtctttcttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctacagaaactagccatggatctcctggacacttgaatctcatgaaagaggtctttcttc 445
Query: 304 agaaaatacaggggcctactaaatggaataaagcaaagaggcatggagaaagtataaaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agaaaatacaggggcctactaaatggaataaagcaaagaggcatggagaaagtataaaag 385
Query: 364 gtaaaacagagagctctaaaaatactcgctcaaaactgctaaatcgtcatgcttgggatt 423
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 gtaaaacagagagctctaaaaatactcgctcaaaactgctaaatcatcatgcttgggatt 325
Query: 424 atcattatgctgcacagataccaaaagatatgtggaaatccaaagagaagtcaccagaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atcattatgctgcacagataccaaaagatatgtggaaatccaaagagaagtcaccagaaa 265
Query: 484 ttatatccattaagcaagaggacaccattttgtctctgaggcctcatggaaacaatcatt 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 264 ttatatccattaagcaagaggacaccattttgtctctgaggcctcatggaaacagtcatt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 944
Length adjustment: 10
Effective length of query: 533
Effective length of database: 934
Effective search space: 497822
Effective search space used: 497822
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_j03.g1 MSMg01no385_j03.g1 CHROMAT_FILE:
MSMg01no385_j03.g1 PHD_FILE: MSMg01no385_j03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:10 2005
(423 letters)
>mm_chrX_72369395_72370212
Length = 818
Score = 795 bits (411), Expect = 0.0
Identities = 418/423 (98%), Gaps = 5/423 (1%)
Strand = Plus / Plus
Query: 1 ctggaattagaatagctgccaaccccaggagacttggacacacatatacacattaaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggaattagaatagctgccaaccccaggagacttggacacacatatacacattaaaaag 260
Query: 61 aataaccaagtcagggaaaaagatctcagtactcccaattattcagtgagatcaatgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aataaccaagtcagggaaaaagatctcagtactcccaattattcagtgagatcaatgttt 320
Query: 121 ctttgttaaacacatgttcttagatggttagtcaatgttaaaattctatgtgaaggatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttgttaaacacatgttcttagatggttagtcaatgttaaaattctatgtgaaggatgg 380
Query: 181 ttaccaaattcatgtcatgttaccttggatgaataaaaaacatagttaaacataaaaggg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaccaaattcatgtc-----accttggatgaataaaaaacatagttaaacataaaaggg 435
Query: 241 taggacataatgaggaaggacactcactggagtagccatagccaacattgggaatagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 taggacataatgaggaaggacactcactggagtagccatagccaacattgggaatagttt 495
Query: 301 ctagtttctaataccatttagattattaccagctgctgaaaatgttaaattttaatttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctagtttctaataccatttagattattaccagctgctgaaaatgttaaattttaatttat 555
Query: 361 tattctgttctctcattgctccctaaattatattttagtaaatgatatatctgaaaattg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tattctgttctctcattgctccctaaattatattttagtaaatgatatatctgaaaattg 615
Query: 421 tta 423
|||
Sbjct: 616 tta 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 818
Length adjustment: 9
Effective length of query: 414
Effective length of database: 809
Effective search space: 334926
Effective search space used: 334926
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
