Query= MSMg01no385_k02.b1 MSMg01no385_k02.b1 CHROMAT_FILE:
MSMg01no385_k02.b1 PHD_FILE: MSMg01no385_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:15 2005
(495 letters)
>mm_chrX_156334870_156335764
Length = 895
Score = 942 bits (487), Expect = 0.0
Identities = 493/495 (99%)
Strand = Plus / Minus
Query: 1 gctatgctttgggttagctgcataacacaaataaggaagacatgctagcacacaaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gctatgctttgggttagctgcataacacaaataaggaagacatgctagcacacaaacttg 484
Query: 61 ccatgccctattttgtctgatatgtttttaaaattttgaattaaaataggattctatcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ccatgccctattttgtctgatatgtttttaaaattttgaattaaaataggattctatcgc 424
Query: 121 tttccccttccccttctctctccagctcttccttgggtgttttaaatggaacaagagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tttccccttccccttctctctccagctcttccttgggtgttttaaatggaacaagagaga 364
Query: 181 agaagagagtaaataagctatgtggtacaatcagagctctctagatctatttcttgttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 agaagagagtaaataagctatgtggtacaatcagagctctctagatctatttcttgttac 304
Query: 241 ataagatctttgtaaagtccagtgcaccaatggttgttgtaatcattactgcgattgtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ataagatctttgtaaagtccagtgcaccaatggttgttgtaatcattactgcgattgtat 244
Query: 301 aggctggactaaatagctagggataaagcggtcataacactccttgagacatggtccagg 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 243 aggctggactaaatagctagggataaagcggccataacactccttgagacatggtccagg 184
Query: 361 ttagctgcaaacttagtatgtaactgaggacgacctcttgatccttcagcttcaaacttc 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 183 ttagctgcaaacttagtatgtagctgaggacgacctcttgatccttcagcttcaaacttc 124
Query: 421 caagtggtaggattacaggtttgcactacaccacctgctatacatgaaactggggattga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 caagtggtaggattacaggtttgcactacaccacctgctatacatgaaactggggattga 64
Query: 481 atccacagctttgtg 495
|||||||||||||||
Sbjct: 63 atccacagctttgtg 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_k02.g1 MSMg01no385_k02.g1 CHROMAT_FILE:
MSMg01no385_k02.g1 PHD_FILE: MSMg01no385_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:15 2005
(442 letters)
>mm_chrX_156160091_156160931
Length = 841
Score = 770 bits (398), Expect = 0.0
Identities = 431/442 (97%), Gaps = 1/442 (0%)
Strand = Plus / Plus
Query: 1 catgcatcccaatgagaatgcattagcatgataggatccactagtgacaatagcgaccga 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct: 201 catgcatcccaatgagaatgcattagcatgataggatccactagtgacaataacaactga 260
Query: 61 gctgtttgagaaactattttttcttctagatatggtgttgttctataagtctggatggcc 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgtttgagaaactattttttcttttagatatggtgttgttctataagtctggatggcc 320
Query: 121 tggaactccccttgtagaccagactgttcccaaacttatgccaacccttctgcttcagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaactccccttgtagaccagactgttcccaaacttatgccaacccttctgcttcagcc 380
Query: 181 tcccaagtactgggattagaggcctataccagcatgcctggccagatcgaagatgtttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 381 tcccaagtactgggattagaggcctataccagcatgcctggccagatcgaaaatatttgt 440
Query: 241 gctaaatatttcaatttagaccaaaagatctcatttttttttcttcctttgatcaaagat 300
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 441 gctaaatatttcaatttagaccaaaagacctcatttttttc-cttcctttgatcaaagat 499
Query: 301 tcccttttctctcaaagctctgtattgacttttgtctctcactacatgaggctatggatt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acccttttctctcaaagctctgtattgacttttgtctctcactacatgaggctatggatt 559
Query: 361 tagagagatggggcaaacctacctttgttatctgtgcagtgcttagtgtggagatcatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagagagatggggcaaacctacctttgttatctgtgcagtgcttagtgtggagatcatgc 619
Query: 421 tcattaaatggttgttatagga 442
||| ||||||||||||||||||
Sbjct: 620 tcagtaaatggttgttatagga 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 841
Length adjustment: 9
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
