CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAAGATCCGCGGA
ATTCCAAAAGTATTTCATATGGTCATTTCAGATATTTAATATTTAAGATC
TTCATACTAAACTATTCATCTTTGTACTCCAATCTTCTTCACTTTGGTAA
TGGAAACCTCAAACTGCTAGTTCCTTAAGCAAAAAATGTTGATCCCATGC
ATATTATCTTTCACATATAAAACTTAATCCATCAGAAAACACTGTTCTGT
ATTCGAAATTCACCCAGAAATTAACCATTTCTAAACCTGATTTGAATTAC
CGCTTCTTGGACCAAAATTATCTATATATAGTCTTATGATATTTCTCCCC
AATTAAGTCATTGCTGTTGTGACATATTTTATTCATCAAGCAGGGGTGAT
ATTTAGAAAACCACATGAACTCACTGCTTTGGATCATAATAAATATTTTA
TTATGTTGGATCCTAGTTACCCTTTTAACGTTAAGGCCTATTATATTTCT
ATTTCTAACATTATGCTCTGTTACACATTTTTCCTCCTTCCTGCATTCAC
ACTGTCTAATTCCTGGCTTTCAGACAGGCAGTAATCAAAATGTTTTGCAC
TAGCCCTTGTTCCTATCAGTGATGTTTTTTTTTTCTCCCATTGATGGCAT
AGTTTAATAGTTTACCACCTTCAAATATTTACTCAAATGTCCCTTTCTTA
AAGGCCTTTCTTGATCTGATTGCTTAAAATGC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTACAAAAATACCCAAGATACAATCCACAGAACTCAAGA
AGGCTAACAGTGCAAAGGGCCCACGTGAGGATACCTCAATCCCACTTGGA
AGGGAGAAGAAAGCAATCACAGGAGAAGGGAGGGAGGGAGGGAACTGGGT
GGGAAAGGTGACAGGGGAGGAAAGAGGGGAACATAATCAGTTATTGGAGG
GGGGAACAGGACTGAAGCCCTGAGGGCTGGAAGAAAGGATAGGAAGAGGA
AACTTCAAGGAGTAGGAGAGGTTGGTCTTCTAGAATGTACCAGAGATCTG
GGAGGTGAGAGACTCTCAGGAATCAAAGGGAGGTACCTTAAATGAAATGC
CTGACAGTAGGGAGAGGGAAATTATAGAGCCCACTTCCAGCAGGAAGACA
GGGCATAATGGGGAGGGATGGCGTTGCTATCCCACAGTCAAAAACACTGA
CCCAGAATTGTTCCTGTCTGAAAGAATTACTGGGATGAAAATGGAGAGGA
GCCTAAGGAAAAGAAGGTCCAGTGACAGGCCCAAAGTGGGATCCAGCTCT
AGGGGAGGCCCCCAGGGGCTGACACTATTATGGATGCTTTGGTGTGCTCA
TTAAAAGTGTTCTATTCTGATGGCTTGACCCAACAAGCAGCTGAAAGATC
ATATGCATATATTCTCACCCCATCTTTGGACATAAGT

Query= MSMg01no386_c05.b1 MSMg01no386_c05.b1 CHROMAT_FILE:
MSMg01no386_c05.b1 PHD_FILE: MSMg01no386_c05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:53 2005
         (574 letters)



>mm_chrX_65525074_65526045
          Length = 972

 Score = 1029 bits (532), Expect = 0.0
 Identities = 556/564 (98%), Gaps = 2/564 (0%)
 Strand = Plus / Minus

                                                                       
Query: 11  tatttaatatttaagatcttcatactaaactattcatctttgtactccaatcttcttcac 70
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972 tatttaatatttaagatcttcatactaaactattcatctttgtactccaatcttcttcac 913

                                                                       
Query: 71  tttggtaatggaaacctcaaactgctagttccttaagcaaaaaatgttgatcccatgcat 130
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912 tttggtaatggaaacctcaaactgctagttccttaagcaaaaaatgttgatcccatgcat 853

                                                                       
Query: 131 attatctttcacatataaaacttaatccatcagaaaacactgttctgtattcgaaattca 190
           |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 852 attatctttcacatataaaatttaatccatcagaaaacactgttctgtattagaaattca 793

                                                                       
Query: 191 cccagaaattaaccatttctaaacctgatttgaattaccgcttcttggaccaaaattatc 250
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 792 cccagaaattaaccatttctaaacctgatttgaattactgcttcttggaccaaaattatc 733

                                                                       
Query: 251 tatatatagtcttatgatatttctccccaattaagtcattgctgttgtgacatattttat 310
            | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ga-agatagtcttatgatatttctccccaattaagtcattgctgttgtgacatattttat 674

                                                                       
Query: 311 tcatcaagcaggggtgatatttagaaaaccacatgaactcactgctttggatcataataa 370
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tcatcaagcaggggtgatatttagaaaaccacatgaactcactgctttggatcataataa 614

                                                                       
Query: 371 atattttattatgttggatcctagttacccttttaacgttaaggcctattatatttctat 430
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atattttattatgttggatcctagttacccttttaacgttaaggcctattatatttctat 554

                                                                       
Query: 431 ttctaacattatgctctgttacacatttttcctccttcctgcattcacactgtctaattc 490
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttctaacattatgctctgttacacatttttcctccttcctgcattcacactgtctaattc 494

                                                                       
Query: 491 ctggctttcagacaggcagtaatcaaaatgttttgcactagcccttgttcctatcagtga 550
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 493 ctggctttcagacaggcagtaatcaaaacgttttgcactagcccttgttcctatcagtga 434

                                   
Query: 551 tgttttttttttctcccattgatg 574
           || |||||||||||||||||||||
Sbjct: 433 tg-tttttttttctcccattgatg 411


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 972
Length adjustment: 10
Effective length of query: 564
Effective length of database: 962
Effective search space:   542568
Effective search space used:   542568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)