Query= MSMg01no386_k10.b1 MSMg01no386_k10.b1 CHROMAT_FILE:
MSMg01no386_k10.b1 PHD_FILE: MSMg01no386_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:30 2005
(464 letters)
>mm_chrX_39712236_39713095
Length = 860
Score = 832 bits (430), Expect = 0.0
Identities = 450/458 (98%), Gaps = 4/458 (0%)
Strand = Plus / Plus
Query: 7 gaattctttgtgatagcctaaggaaggttgatttaaaaaaaaacctgttattattatttt 66
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
Sbjct: 207 gaattctttgtgatagactaaggaaggttgatt---aaaaaaacctgttattattattat 263
Query: 67 ttttttgtttagctgtacagtgaattttctccgcacagattggcctaccaatctgtttga 126
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttt-gtttagctgtacagtgaattttctccgcacagattggcctaccaatctgtttga 322
Query: 127 ctcataaagatgcatgtcgagaatcagagctggtgccagtgtgcgctgctgattagaatc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ctcataaagatgcatgtcgagaatcagagctggtgccagtgtgcgctgctgattagaatc 382
Query: 187 ttctcaactttgaaaactctaggcttgatcctcactaagcccttgtcaatgaaggaggaa 246
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttctgaactttgaaaactctaggcttgatcctcactaagcccttgtcaatgaaggaggaa 442
Query: 247 tgagataactatatgtttaacatgctttcctggtgattctcattagcagcttggcatggg 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgagataactatatgtttaacatgctttcctggtgattctcattagcagcttggcatggg 502
Query: 307 gccataggcttgcattgtgggctgactaaagacagtactggcttgttgtggagggaaggg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gccataggcttgcattgtgggctgactaaagacagtactggcttgttgtggagggaaggg 562
Query: 367 gatgagggaaggttgaaggggattccttgatccctttctccaacaccggctccagccata 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gatgagggaaggttgaaggggattccttgatccctttctccaacaccggctccagccata 622
Query: 427 tttggagggctcaagatccgtgtgcttatggaaatggc 464
|||||||||||||||||| |||||||||||||||||||
Sbjct: 623 tttggagggctcaagatctgtgtgcttatggaaatggc 660
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 860
Length adjustment: 10
Effective length of query: 454
Effective length of database: 850
Effective search space: 385900
Effective search space used: 385900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_k10.g1 MSMg01no386_k10.g1 CHROMAT_FILE:
MSMg01no386_k10.g1 PHD_FILE: MSMg01no386_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:30 2005
(668 letters)
>mm_chrX_39892514_39893581
Length = 1068
Score = 963 bits (498), Expect = 0.0
Identities = 507/510 (99%)
Strand = Plus / Minus
Query: 1 tcacaagtataggagggatgtgcccttgtgtaacacacatacatcatgcttctgtcgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcacaagtataggagggatgtgcccttgtgtaacacacatacatcatgcttctgtcgttt 451
Query: 61 tctaaaaattcacattgcatatgtttaagtaattaacattcacaattatttgtgtgattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tctaaaaattcacattgcatatgtttaagtaattaacattcacaattatttgtgtgattt 391
Query: 121 gcaggtagaaaatggaaagacgcctattgttttcacaacatggagttcagaagttgaact 180
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gcaggtagaaaatggaaagacacctattgttttcacaacatggagttcagaagttgaact 331
Query: 181 tatttttttgttgttgttgttttgtaattctcaaaagagtgaaactcaaggcattatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tatttttttgttgttgttgttttgtaattctcaaaagagtgaaactcaaggcattatagt 271
Query: 241 cgagtacctgggtgaatttttcctttttatttaaagacagaagcactgagggtgtagcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cgagtacctgggtgaatttttcctttttatttaaagacagaagcactgagggtgtagcgt 211
Query: 301 agtgtatgtgagtgcttgctacagaacagtgaggacttgaattcaaatccccaacatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agtgtatgtgagtgcttgctacagaacagtgaggacttgaattcaaatccccaacatcaa 151
Query: 361 aaaagctccgcacacagagcttcacgtttgcctagagctctaatgctgtaggggacagga 420
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 aaaagctccacacacagagcttcacgtttgcctagagctctaatgctgtaggggacagga 91
Query: 421 cttggaacttgctgcccaccaggatggctccagattcattaaaagataattcctcaggag 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 90 cttggaacttgctgcccaccaggatggctccagattcattaaaagatagttcctcaggag 31
Query: 481 aataggacagagagttaggataggatagcc 510
||||||||||||||||||||||||||||||
Sbjct: 30 aataggacagagagttaggataggatagcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
