Query= MSMg01no387_f03.b1 MSMg01no387_f03.b1 CHROMAT_FILE:
MSMg01no387_f03.b1 PHD_FILE: MSMg01no387_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:20 2005
(343 letters)
>mm_chrX_43112224_43112967
Length = 744
Score = 596 bits (308), Expect = e-175
Identities = 332/340 (97%), Gaps = 1/340 (0%)
Strand = Plus / Plus
Query: 5 ggaattcttagccttttcc-ggggcacctatgctataaacccccttcactgtgctcatag 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcttagccttaaacaggggcacctatgctataaacccccttcactgtgctcatag 264
Query: 64 atgacttcacaactaggggaagatgtatgagatctagagtcagtggatatgcacaaatgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgacttcacaactaggggaagatgtatgagatctagagtcagtggatatgcacaaatgt 324
Query: 124 ctactgaatataaccagggaagctgtatgagatctagagtcagtggatatgcacaaatgt 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 325 ctactgaatataaccagggaagctgtatgagatctagagtcagtggatatgcacaaatat 384
Query: 184 ctactgaatacaaccaggcattatgtatatgaattcacagtagctgtgactgcatccacc 243
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 385 ctactgaatacaaccaggcattatgtatatgaattcacagtagttgtgactgcatccaca 444
Query: 244 agactatagaagttcaactagacaaaatcccagcatgaaaagatgttagttacttttcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agactatagaagttcaactagacaaaatcccagcatgaaaagatgttagttacttttcta 504
Query: 304 gtgctgtgatgagacactgtaacctaggtaacttatagta 343
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 gtgctgtgatgagacactgtaccctaggtaacttatagta 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_f03.g1 MSMg01no387_f03.g1 CHROMAT_FILE:
MSMg01no387_f03.g1 PHD_FILE: MSMg01no387_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:20 2005
(436 letters)
>mm_chrX_43238312_43239146
Length = 835
Score = 812 bits (420), Expect = 0.0
Identities = 432/436 (99%), Gaps = 1/436 (0%)
Strand = Plus / Minus
Query: 1 agttaacctgaacatttattgattggattacttacttgttttgtgtgattaagttgtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agttaacctgaacatttattgattggattacttacttgttttgtgtgattaagttgtcaa 576
Query: 61 atattgtgcatgattatcatttttgcataaatatgtgacaatttttcactctttgtgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 atattgtgcatgattatcatttttgcataaatatgtgacaatttttcactctttgtgatt 516
Query: 121 ctttactgtttttcctttttgctgtttagaagttttaatttgatgcaatgaaaactgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ctttactgtttttcctttttgctgtttagaagttttaatttgatgcaatgaaaactgtca 456
Query: 181 catttttatattacttcctgtgctgtttgaattctccaaacaatgaaaactcatatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 catttttatattacttcctgtgctgtttgaattctccaaacaatgaaaactcatatttat 396
Query: 241 cctctttctatttatatactttttattcacttgtcttgcctgtttgccatcttgcttcat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 cctctttctatttatatactttttattcacttgtcttgcctgtttgccatcttgcttcat 336
Query: 301 aatggctgctcttaaagaaaagtgatgtgactacatacccctgacttctttctaatgtta 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aatggctgctattaaagaaaagtgatgtgactacatacccctgacttctttctaatgtta 276
Query: 361 gaggtatttaattagtgtcgttttgcaagaggtttttaaaattcattattatgttgatat 420
|||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||
Sbjct: 275 gaggtatttaattagtgtggttttggaagaggtttttaaaat-cattattatgttgatat 217
Query: 421 attatctatctgtaca 436
||||||||||||||||
Sbjct: 216 attatctatctgtaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 835
Length adjustment: 9
Effective length of query: 427
Effective length of database: 826
Effective search space: 352702
Effective search space used: 352702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
