Query= MSMg01no387_j09.b1 MSMg01no387_j09.b1 CHROMAT_FILE:
MSMg01no387_j09.b1 PHD_FILE: MSMg01no387_j09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:40 2005
(313 letters)
>mm_chrX_163979931_163980643
Length = 713
Score = 505 bits (261), Expect = e-147
Identities = 293/309 (94%), Gaps = 11/309 (3%)
Strand = Plus / Minus
Query: 7 gaattccaggccattctgggccatagaataaaaccatgttttgaaacacaaaacaaacat 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gaattccaggccattctgggccatagaataaaaccatgttttgaaacacaaaacaaacat 648
Query: 67 aaatcaacacctggcttcctgggcaaaacctatggtcgtattatgtgaacaggaaacctc 126
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aaatcagcacctggcttcctgggcaaaacctatggtcgtattatgtgaacaggaaacctc 588
Query: 127 tatgatgctaaaatgtatcaatcatgttgaattttaccctaataataatgtattttaaaa 186
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 587 tatgatgctaaaaagtatcaatcatgttgaattttaccctaataataatgtatattaaaa 528
Query: 187 taaatgtatatt--aaaaataaagattcctagaataaatatcagaatggatgctgtacga 244
| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 -----gga----ccaaaaataaagattcctagaataaatatcagaatggatgctgtacga 477
Query: 245 cacaatttgtagataggttaaacaggatcagactgtttctagtcactgcatctctttacg 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 476 cacaatttgtagataggttaaacaggatcagactgtttctagtcactgcatctctttagg 417
Query: 305 gaaattaga 313
|||||||||
Sbjct: 416 gaaattaga 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no387_j09.g1 MSMg01no387_j09.g1 CHROMAT_FILE:
MSMg01no387_j09.g1 PHD_FILE: MSMg01no387_j09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:41 2005
(284 letters)
>mm_chrX_163790343_163791025
Length = 683
Score = 487 bits (252), Expect = e-142
Identities = 276/284 (97%), Gaps = 1/284 (0%)
Strand = Plus / Plus
Query: 1 acccctagcactgaaaacaaaaataaaatctatttttgaaaattatatcttaaatattca 60
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 201 acccctagcactgaaaacaaaaataaaatctatttttgaaaaacatattttaaatattca 260
Query: 61 gcaagcaaccacagtgaaggtaatgaaaaggattgggccacacttgtcataccaggcata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaagcaaccacagtgaaggtaatgaaaaggattgggccacacttgtcataccaggcata 320
Query: 121 gttgagaccctataccacacaatctacatggaaaaacaggctaatgatgaactttgcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gttgagaccctataccacacaatctacatggaaaaacaggctaatgatgaactttgcat- 379
Query: 181 ctattgcagcttaccacatatgtcagggcaccctagcagctagataagactgctggttaa 240
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 380 ctattgcatcttaccacatatgtcagggcaccctagcagctagataagactgttggttaa 439
Query: 241 gaaactgatactggatttgttaggatttgggagttcatttaaaa 284
||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 gaaactgatactgcatttgttaggatttgggagttcatttaaaa 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 683
Length adjustment: 9
Effective length of query: 275
Effective length of database: 674
Effective search space: 185350
Effective search space used: 185350
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
