TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAATGAGACTGAAGTAAATCTCAGAGCATTATATCTGATCAAATAC
CCTGATAATATCCAATATCCTGTATAAGGAATACAAGATTATTTTCATAG
TATCTTGTCTGGTCTGTTAAGGTTTCTCTTCTTTCTCCTGTAACATGGAC
AATTATTAAGGTTGATAAAATTCAATATCTGGTCTTTCAATTTGTTCAGA
AATTGAGCAAAATTCATTTATCTTAATACAATGACAAAAGGTTTTTCAGA
CTAAATGGAGGACAAAATCATACAAAGAAACAAAACTGTTTTCTCTTTCC
TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCC
TTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTTCTTTTC
TTCCCTTTTCTTTTCTTGNACGAGCCAAGACNAAATTAATAAAATGGATT
CATGGANAGAATAAGTCATATCCCTTATGATTTTCTCCACCCAAGTTGCT
AAGCTAAGAGATGGTATTGCTCCGCCCTTAATGATTCGCCTTCCCTTGAT
CCTGAACCGCCCCGTTCAACTTCCCACTAATGAACCCTCATCCCCGGCCG
GCACCCAAACCCCACCTTCCCCANCCCCCCCCCCTTCCCCCCTTCCGCCG
CCAAACCCCTTCCTCCACCCCACCCCCCTATGATATATATCACCCCCTCC
TTCTCCCCTTTCTCTCCC

NNNNNCCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACC
GAAGGGATGAGAAGCACCTGGAAAATGTTCAGCATCCTTAATCATCAGGA
AAATGCAAATCAAAACAACTCTGAGATTCCACCTCACACCTGTCAGAATG
GCTAAGATAAAAAATTCAGGTGACAGCAGATGCTGGCGAGGGTGTAAAGA
AAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTGCAACCAC
TCTGGAAATGAGTCTGGTGGTTCCTCAGAAAATTGAACATAGTACTACCA
GAGGATCAAGCAATGCCTTTCCTGGGCATCTATCCATAAGATGTTCCAAC
CGGTAAGAAGGACACATGCTCCACTATGTTTATAGCAGCCTTATTTATAA
TAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATGGATA
CAGAAAATGTGGCACATTTACACCATGGAATACTACTCAGCTATTAAAAA
GAATGAATTTATGAAATTCCTATGCCAAAGTCTGGACCCTGTAGGGAACC
CCCCCGAGTGAGGTTACCCCATCCCAAAAGAACCCACATGACCTGTTACC
CCCTGAAGACTGAAAATTTATCTCCCAAACCTTTTTAATTTTCAAAAACC
CCTTTTGTTAACACCTTGCCACCCTTTCACAAATGGAAATCCCTCTTTTG
TCCCCTCCTCCTCCCTTC

Query= MSMg01no387_o05.b1 MSMg01no387_o05.b1 CHROMAT_FILE:
MSMg01no387_o05.b1 PHD_FILE: MSMg01no387_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:04 2005
         (412 letters)



>mm_chrX_119291535_119292346
          Length = 812

 Score =  752 bits (389), Expect = 0.0
 Identities = 404/409 (98%), Gaps = 1/409 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   gaattcaaatgagactgaagtaaatctcagagcattatatctgatcaaataccctgataa 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaaatgagactgaagtaaatctcagagcattatatctgatcaaataccctgataa 263

                                                                       
Query: 64  tatccaatatcctgtataaggaatacaagattattttcatagtatcttgtctggtctgtt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatccaatatcctgtataaggaatacaagattattttcatagtatcttgtctggtctgtt 323

                                                                       
Query: 124 aaggtttctcttctttctcctgtaacatggacaattattaaggttgataaaattcaatat 183
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 aaggtttctcttctttctcctgtaacatggacaattattaaggttgataaaattcagtat 383

                                                                       
Query: 184 ctggtctttcaatttgttcagaaattgagcaaaattcatttatcttaatacaatgacaaa 243
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 ctggtctttcaatttgttcagaaattgagcaaaattcatttctcttaatacaatgacaaa 443

                                                                       
Query: 244 aggtttttcagactaaatggaggacaaaatcatacaaagaaacaaaactgttttctcttt 303
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 444 aggtttttcagactaaatggaggacaaaatcatacaaaaaaacaaaactgttttcccttt 503

                                                                       
Query: 304 cctttcctttcctttcctttcctttcctttcctttcctttcctttcctttcctttccttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cctttcctttcctttcctttcctttcctttcctttcctttcctttcctttcctttccttt 563

                                                            
Query: 364 cctttcctttcctttcctttcctttcctttccttttcttttcttccctt 412
           ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctttcctt-cctttcctttcctttcctttccttttcttttcttccctt 611


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 89
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space:   323609
Effective search space used:   323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)