Query= MSMg01no388_a16.b1 MSMg01no388_a16.b1 CHROMAT_FILE:
MSMg01no388_a16.b1 PHD_FILE: MSMg01no388_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:16 2005
(527 letters)
>mm_chrX_115200717_115201643
Length = 927
Score = 973 bits (503), Expect = 0.0
Identities = 518/523 (99%)
Strand = Plus / Plus
Query: 5 gaattccttataggctgcaataaatttgtacaaatgattttaatgttatttatatttagt 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttataggcagcaataaatttgtacaaatgattttaatgttatttatatttagt 264
Query: 65 taaatttttcattttattaatttgttttggtaagatgtatatgttaaatatatctttgtc 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaaattttcattttattaatttgttttggtaagatgtatatgttaaatatatctttgtc 324
Query: 125 actgctattatgtggatgtagaagagaagttgggggagttagttccctctctgtcttatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 325 actgctattatgtggatgtagaagagaagttgggggagttagttccctctccgtcttatg 384
Query: 185 ggtcttttttaattaatcaattaatttacatccaacacggcccttccctccctgtccctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtcttttttaattaatcaattaatttacatccaacacggcccttccctccctgtccctt 444
Query: 245 tccacagagacccccctcatcctcatcttctcctctgagcgtgtgcccacccatccctgg 304
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 445 tccacagagacccccctcatcctcatcttctcctctgagagtgtgcccacccatccctgg 504
Query: 305 tatccccttaccctggcacatcaagtctctgttagggtatgcacactctctccactctct 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatccccttaccctggcacatcaagtctctgttagggtatgcacactctctccactctct 564
Query: 365 cattgagacgagacaagatagccctgttggagaaaagataccaaaatcagactgttctcc 424
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 cattgagacgagacaagatagccctgttggagaatagataccaaaatcagactgttctcc 624
Query: 425 acttgttggagggtccatacagaggctcagctatatatctgctacatatgtgtctggggt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acttgttggagggtccatacagaggctcagctatatatctgctacatatgtgtctggggt 684
Query: 485 cttgggtcttgttaaagaccatatgctctttggttgatgtctc 527
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttgggtcttgttaaagaccatatgctctttggttgatgtctc 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_a16.g1 MSMg01no388_a16.g1 CHROMAT_FILE:
MSMg01no388_a16.g1 PHD_FILE: MSMg01no388_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:17 2005
(562 letters)
>mm_chrX_115392968_115393929
Length = 962
Score = 656 bits (339), Expect = 0.0
Identities = 354/359 (98%), Gaps = 2/359 (0%)
Strand = Plus / Minus
Query: 1 aaggcaaagaacattaaatgagttgtataattatttctgatagttgggatatttatacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 aaggcaaagaacattaaatgagttgtataattatttctgatagttgggatatttatacat 299
Query: 61 tctgggttaacttttagttaaattgtctctctgcttttggttttaaaaaaggggcttatt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 298 tctgggttaacttttagttaaattgtctctctgcttttggttttaaaaaagggggttatt 239
Query: 121 tccattcttcactcatggaacatgtgagctctgtaaccatgaatagtgctgcctttaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tccattcttcactcatggaacatgtgagctctgtaaccatgaatagtgctgcctttaacc 179
Query: 181 atctgtgtacaaatactatgtgaaattatggtttcagttccctttagtatttacatagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 atctgtgtacaaatactatgtgaaattatggtttcagttccctttagtatttacatagaa 119
Query: 241 ttgttattgctgtgttatttaaaattctatttaatttatacaggaacaaaaatgccagtt 300
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 ttgtaattgctgtgttatgtaaaattctatttaatttatacaggaacaaaaatgccagtt 59
Query: 301 tt-ctcagttgtctgatatatttgaaatctatgcagactccactttttcacaactatac 358
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 ttcct-agttgtctgatatatttgaaatctatgcagactccactttttcacaactatac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
