Query= MSMg01no389_d06.b1 MSMg01no389_d06.b1 CHROMAT_FILE:
MSMg01no389_d06.b1 PHD_FILE: MSMg01no389_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:43 2005
(429 letters)
>mm_chrX_33510157_33510986
Length = 830
Score = 783 bits (405), Expect = 0.0
Identities = 424/431 (98%), Gaps = 3/431 (0%)
Strand = Plus / Minus
Query: 1 atatactaattaataatgctgtactttgtcaacttctcttttgtgagcttttcccattgt 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 atatactaattaagaatgctgtactttgtcaacttctcttttgtgagcttttcccattgt 571
Query: 61 tggtgaatgttcctgtatctggcaactattgtctaaagaacaagcaaagaggctacatgg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 570 tggtgaatgttcctgtatctggcaactattatctaaagaacaagcaaagaggctacatgg 511
Query: 121 attttaatctatggaaaagctatcacagacccagagtccttaaaaaacctatagcaatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 attttaatctatggaaaagctatcacagacccagagtccttaaaaaacctatagcaatga 451
Query: 181 acataatatctgacccctaaaattcccaatgttttggcacttatgcagaggaggtatgtg 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 acataatatctgaccc-taaaattcccaatgttttggcacttatgcagaggaggtatgtg 392
Query: 241 tgtgtata--tgtgtacatgtattcacatgtgtatatctggcgctacatttgcattggac 298
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tgtgtgtacatgtgtacatgtattcacatgtgtatatctggcgctacatttgcattggac 332
Query: 299 ttcccaaaatattcccattggatttcctaccatggttctacctaaaaatgtcactctacc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 331 ttcccaaaatattcccattggatttcctaccatggttctacctaaaaatgtcactctgcc 272
Query: 359 aaaatgtgactaacatgttcatcgcttttcatttcccattgccaacctcagtcagcaaaa 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaaatgtgactaacatgttcatcgcttttcatttcccattgccaacctcagtcagcaaaa 212
Query: 419 gaccatttgta 429
|||||||||||
Sbjct: 211 gaccatttgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 830
Length adjustment: 9
Effective length of query: 420
Effective length of database: 821
Effective search space: 344820
Effective search space used: 344820
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_d06.g1 MSMg01no389_d06.g1 CHROMAT_FILE:
MSMg01no389_d06.g1 PHD_FILE: MSMg01no389_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:44 2005
(477 letters)
>mm_chrX_33360942_33361818
Length = 877
Score = 915 bits (473), Expect = 0.0
Identities = 476/477 (99%)
Strand = Plus / Plus
Query: 1 aaagaggcctccctggggcagaggtagatagatgcagagagtcactgaggctgttagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagaggcctccctggggcagaggtagatagatgcagagagtcactgaggctgttagata 260
Query: 61 agacattaaggaacacagcagaagagcttctggagcctcaggagagcaaagccatagcca 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacattaaggaactcagcagaagagcttctggagcctcaggagagcaaagccatagcca 320
Query: 121 agctgtgaaagtggaggatggagaaacagctaataggcagctcaagctggacacttcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agctgtgaaagtggaggatggagaaacagctaataggcagctcaagctggacacttcaag 380
Query: 181 cagaggggactaagctgtgctgaagcttatgggatatagagagttctctgtttttgacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagaggggactaagctgtgctgaagcttatgggatatagagagttctctgtttttgacat 440
Query: 241 aaaccacgtggtcaggttgcagttcccagagtttgtaactcttgtcattaaaatgatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaccacgtggtcaggttgcagttcccagagtttgtaactcttgtcattaaaatgatagg 500
Query: 301 gcctgtctttttataggggccagataagcgtatcccacctttcgatgtattcacaaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctgtctttttataggggccagataagcgtatcccacctttcgatgtattcacaaagtt 560
Query: 361 ctggggcctgatttttttctgatatacttttaataagccattgtagtcatatattccagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctggggcctgatttttttctgatatacttttaataagccattgtagtcatatattccagt 620
Query: 421 ctatttgatatgttttaggtgctactcttgtagttttacagtctgtgcttgcttgta 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctatttgatatgttttaggtgctactcttgtagttttacagtctgtgcttgcttgta 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
