Query= MSMg01no390_g10.b1 MSMg01no390_g10.b1 CHROMAT_FILE:
MSMg01no390_g10.b1 PHD_FILE: MSMg01no390_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:18 2005
(454 letters)
>mm_chrX_5661556_5662409
Length = 854
Score = 694 bits (359), Expect = 0.0
Identities = 375/383 (97%), Gaps = 7/383 (1%)
Strand = Plus / Minus
Query: 72 agatgtactgatgcagaagtagctaagagttctacatctggatccccaggcagcaagaag 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 agatgtactgatgcagaagtagctaagagttctacatctggatccccaggcagcaagaag 795
Query: 132 aaagagacactaggcctcactaaaagcccacccaccgtcagagacacacttcttctaaaa 191
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 794 aaagagacactaggcctcactaaaagcccacccaccgtcagagacaca---cttctaaaa 738
Query: 192 aggaccaggcaacaagcccacaggcagcacctgcacctgcacgtgcgtgtgtgtgagtgt 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 aggaccaggcaacaagcccacaggcagcacctgcacctgcacgtgcgtgtgtgtgagtgt 678
Query: 252 gagtgtgtgtgtatgtatgtgtgtgtgcattgtctgctattttaaaatctgtattaaatg 311
|||||| |||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 gagtgtatgtg--tg--tgtgtgtgtgcattgtctgctattttaaaatctgtattaaatg 622
Query: 312 attccaggacccaaccagtcctattttgatttactattttaatatttcacttgacactat 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attccaggacccaaccagtcctattttgatttactattttaatatttcacttgacactat 562
Query: 372 atttccctcatttttcagatgcagtatttttctttcatgtattaggtgctttctgctcca 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttccctcatttttcagatgcagtatttttctttcatgtattaggtgctttctgctcca 502
Query: 432 ttctggttttgtccattatattc 454
|||||||||||||||||||||||
Sbjct: 501 ttctggttttgtccattatattc 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_g10.g1 MSMg01no390_g10.g1 CHROMAT_FILE:
MSMg01no390_g10.g1 PHD_FILE: MSMg01no390_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:18 2005
(579 letters)
>mm_chrX_5627462_5628440
Length = 979
Score = 1102 bits (570), Expect = 0.0
Identities = 576/578 (99%)
Strand = Plus / Plus
Query: 2 cttccccatagatccctgagcctcgaggaagggtgtttaataaagagagccccagttcat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cttccccatagatccctgagcctcgaggaagggtgtttaataaagagagccccagttcat 261
Query: 62 tgctctcacaattatttttaaaacataactactgctaaaactttgagcatcatctttata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgctctcacaattatttttaaaacataactactgctaaaactttgagcatcatctttata 321
Query: 122 aaaagatggttttcatttagttcatgtacatatcaatgtgtgaatcaattggtatttcag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaagatggttttcatttagttcatgtacatatcaatgtgtgaatcaattggtatttcag 381
Query: 182 gaatgcatgaagtacatcaatatccagctacagaaactcacactctatttctaactcctt 241
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 382 gaatgcatgaagtacatcaatatccagctccagaaactcacactctatttctaactcctt 441
Query: 242 atcacaatactgggattcttcttctgtcttttaataccagagataattttggttttgaac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 atcacaatactgggattcttcttctgtcttttaataccagagataattttggttttgaac 501
Query: 302 tgtatgtatcccggttcttactgccttattgtgcaacttaatattcagagtattcaaatg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tgtatgtatcccggttcttactgccttattgtgcaacttaatattcagagtattcaaatg 561
Query: 362 tttttctccattgggctggagttatttaaaaattcatactgctttaagcttctaaaagtg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tttttctccattgggctggagttatttaaaaattcatactgctttaagcttctaaaagtg 621
Query: 422 gggtccttggatttttctaaagaaatgtggtttacctttaagaaaaaatttcttgcacat 481
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 622 gggtccttggatttttctaaagaaatgcggtttacctttaagaaaaaatttcttgcacat 681
Query: 482 ttaaaacataaagcctaatttccaaaatatatcttgatctctcatcaaaggaaaaattat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ttaaaacataaagcctaatttccaaaatatatcttgatctctcatcaaaggaaaaattat 741
Query: 542 atgactaatttgaagcacttatttttaattctaatcaa 579
||||||||||||||||||||||||||||||||||||||
Sbjct: 742 atgactaatttgaagcacttatttttaattctaatcaa 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
