TTCCCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXTATTCCAGAGGAT
CCGCGGAATTCCAAGCTTTTCCTCAGCTCAAGGACTTTCTAGGACATTGG
AACACTGGTGAAGGCTTAGCTATGTCAGAATTCAATCTTAAAAGGCACTT
ATAATAAGATAATACTATAAGATCCATACACCAGACTAACTGGGAAGATG
GGGTATGAGTATATGGGTTAAAGAGAACGCCAGACTCCAGGAGGTGAGTT
TCCCGTGTAACTCTCTGTCTCGTGAGTGGTTTTCAGGTCTCTCAGCCTGT
AATGCTGACCTGACCGGAGTGCATGTTTTTTTATTTGTTCTCTGATCTCC
TCCCACGTGTCATGTACTTCGTGACCTGTGAATACATATCCTCCCTACCT
TATGGCGATATTTTTTTTATTACCCCCACCATCTTTTATTAGTATTGCCC
ATCCTTCTATTTTCTCCCTTCATCTTCTTCTTCTCCTGCCTTGTCTTTCT
CCCTCTCTGTTCTCGACTTTCTACCTTCTTTCTTCTCTCTCCTCCCTTCC
CTTTTTCCCCTTTCACCTCCCCTTCTTTATCTTCCCCTTTTCCTCTTCCT
TTCCTTTCCCCCTTTCCTTTTCTTCTTCCTCTTGCCTTCACCTTTCCTTG
CCTCATATCTTACCCCTTTTCCCCTTCTTATTCCCCTTCTCCTCCCCCCC
TCCCCTAGTCATTCGTACGACTACTACTAACGTCTTATCCTTCCCTTTCT
CCCTCCCCTTTTTCTCTACCTTTCCTCCTTCTAATACTCCGTCTTTCCCC
TTTGTCCTCTCCCCCCACTCTTCTACCTTTCTTCCACATTTTTTCACTCC
CCCTCCCN

NTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTGTTCTTTGTTTTCACTAA
ATAGGATCCCTAACAATTTACTTTAACCATGATCCCCGCACTGTCCCAGA
GCACTAAAGTAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAGAAAAAAAAA
AGAATACTTTGTAGCATGGATTTTTTAAAACTAATGTTCACACTTGAAAA
TACTATTTATGAGTTCATTCTTTTACAAAACTACATATATGTAGCTGAAT
TAATTGACTCCATTTTCTAAGTTAGCCAACTTAAAACTGTTTCTTTCTCT
CTTTAGGCATTGGAACGAACTGTAGTTACTCTAACACTTTGGGATTTACT
ATTCTTTCTCTAACTCATTCTTCCCAGCTATGATGTATTCTTTTCCTCTG
AGCACCAGTTGAGTTCTGCAGCTTGCTTGCCATTTTTCTTCCCTTTTTCA
ATTTAAGAATTGTTTGATTTTTAAATAATACTTTACTAATTTTTTGAAAT
GTACTTCTTATATTTTAATCATAAATACATTCTGATACACAGATTCACCT
TGAATCCTTTACCCTTAAAAATCTCTTAAAATTTTTTTTTTAATTTTTAA
ACATACCTGAAAACGTATTGTGTTTCTCCAAATACCTTTTGGGAAAATGG
TGGAAAAAAGTTGTTTATCCACCCCCTTGTTCACCCCCCTAAAGAAAATT
GATTTGTTTTGCTCCCAAAAATTTCCCAAGTTN

Query= MSMg01no394_p05.g1 MSMg01no394_p05.g1 CHROMAT_FILE:
MSMg01no394_p05.g1 PHD_FILE: MSMg01no394_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:31 2005
         (469 letters)



>mm_chrX_41352962_41353830
          Length = 869

 Score =  833 bits (431), Expect = 0.0
 Identities = 451/469 (96%), Gaps = 18/469 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgttctttgttttcactaaataggatccctaacaatttactttaaccatgatccccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 cttgttctttgttttcactaaataggatccctaacaatttactttaaccatgatccccgc 278

                                                                       
Query: 61  actgtcccagagcactaaagtaaaaaaaaaaaaaaaaaaagaaaaaaaaaagaaaaaaaa 120
           ||||||||||||||||||||||||||||||||||                  ||||||||
Sbjct: 279 actgtcccagagcactaaagtaaaaaaaaaaaaa------------------aaaaaaaa 320

                                                                       
Query: 121 aagaatactttgtagcatggattttttaaaactaatgttcacacttgaaaatactattta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagaatactttgtagcatggattttttaaaactaatgttcacacttgaaaatactattta 380

                                                                       
Query: 181 tgagttcattcttttacaaaactacatatatgtagctgaattaattgactccattttcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagttcattcttttacaaaactacatatatgtagctgaattaattgactccattttcta 440

                                                                       
Query: 241 agttagccaacttaaaactgtttctttctctctttaggcattggaacgaactgtagttac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttagccaacttaaaactgtttctttctctctttaggcattggaacgaactgtagttac 500

                                                                       
Query: 301 tctaacactttgggatttactattctttctctaactcattcttcccagctatgatgtatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctaacactttgggatttactattctttctctaactcattcttcccagctatgatgtatt 560

                                                                       
Query: 361 cttttcctctgagcaccagttgagttctgcagcttgcttgccatttttcttccctttttc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cttttcctctgagcaccagttgagttctgcagcttgcttgccatttttcttccctttttc 620

                                                            
Query: 421 aatttaagaattgtttgatttttaaataatactttactaattttttgaa 469
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatttaagaattgtttgatttttaaataatactttactaattttttgaa 669


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space:   394281
Effective search space used:   394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)