AATCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCTGTCTTACGATTCAAGTATGTGGTACCTTCAGCAATAGCTTC
TTACCTTCAAGTTGTGGTTGGTACCCAAGAGTATTGGCAATAGCTTGCAT
TGTTTTGAGAGACTATGGGATTCCTCTGACCAACAAACGGAAGAGAAATG
ATACATATCTAGCACAGGAATTTTTATCTGACAGCTCATGGCATGTAAGA
GTCATTCTCCTAGATAGTTCAGAATACTTAAAAATATATAGTTGTCTATG
TATATTGGTTTGCCTAATTGCTGTTTTTAGGATCTCTTATATGTTTTTGA
TATCAGAATGTTTTCAGATATAGTCAATAACAATGTGGTCTCATCTTGTA
GGCCATTTTTTGCACTGTGTTGAATATTTCCTTCATTATAATAAAGCTTT
TATAGTTGCTCTAATTCCACTTGTATACTTTTGTTTTCATTGTATGTATT
TCAGAGGGATTATATCCCAAAAATCTTGCCCATTTCAATATAGTGAAGCA
TTTCTTTGTGCTTTATTCTAGTAGTTTGATTAAGTCGTGTCTTAGATTAA
GGTCTTAAACATTCATCTGCATGGGGCTGTGCCGTTTTCTAACACTTTGT
TGAAGGAGCTGCTTCTTTCTTCCAGTATTGTTTTTTGCCTCCTTTTGTTA
AAAACCCATTGGTTGATAGATGCGGGGAATTTATTTCCAGGGCTCTCCGC
TTCTTTCCCCCGGTGGCGGATTGTGTGN

CCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTCACTGCTTTCCAAAATAGTTGTA
CATTTAAATATTTAAATGAAACACTTAATATCATTCTTGTTATATTTCCT
TTTCTTGGATTCTTTCTCAAGGTAACATATTGCTGAAATAAAAGTTAGAA
TCATGATATTCGTAGGTCTTCTATTTCCTAACTATCAATCTATCCTCATC
CAAAAGTTGACAACTTGGATATTTTGAAGGGGCAATATGGAAATCCCTGC
AACTTTAGAAACATATGAGCCTGATAACATTGCTTAACCAGTTGTGAACT
CACATAACTGTGTTTAGAGTTAGCATTTTTTCCAGTTTCTTAACTTAGCC
ATAAAGTTACTGTGAAAACATAATCTATTTGTCTGTTTTTTGCTGTTTCA
TTTTAAAATTTTTGGAAGGTTTTGGAGACAGGGTCTTCCTTGTAGCCCAG
TCTAACCCAGAAACCCCCTCAGTTCTCCAGCCTCTGCGTTTCAGAATCCT
GGGATTGCAAGCTCAAGCTACAATGCCCGATTTTCTGGGTGTTGTTGTTG
TTGTNTTGTGTGNTTCCTAAACGCCCTGGTGATAATGATACAAACATGGC
TCTAGTGGTGATTCTCTTACTAAAGACAGGGCCCCTCTTTTAATTTTATT
TCAATCCTCCCGAATGGCTTAATATATAGTAATCAAAAAATATTCTAAAG
CCTCCCCCCCCTTTTGCGGAAACACAAC

Query= MSMg01no400_d15.g1 MSMg01no400_d15.g1 CHROMAT_FILE:
MSMg01no400_d15.g1 PHD_FILE: MSMg01no400_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:28 2005
         (507 letters)



>mm_chrX_63287900_63288813
          Length = 914

 Score =  665 bits (344), Expect = 0.0
 Identities = 468/512 (91%), Gaps = 10/512 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcactgctttccaaaatagttgtacatttaaatatttaaatgaaacacttaatatcatt 60
           |||||| ||||||||||||||||| ||||||||||||||||| ||| |||| ||||||||
Sbjct: 201 ctcactactttccaaaatagttgtgcatttaaatatttaaataaaagacttgatatcatt 260

                                                                       
Query: 61  cttgttatatttccttttcttggattctttctcaaggtaacatattgctgaaataaaagt 120
           ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 261 cttgttatagttccttttcttggattcattctcaaggtaacatattgttgaaataaaagt 320

                                                                       
Query: 121 tagaatcatgatattcgtaggtcttctat-ttcctaactatcaatctatcctcatccaaa 179
           | |||||||||||||| |||||| ||||| |||| | |||||||||| ||||||||||||
Sbjct: 321 ttgaatcatgatattcataggtcatctatattcc-agctatcaatctgtcctcatccaaa 379

                                                                       
Query: 180 agttgacaacttggatattttgaaggggcaatatggaaatccctgcaactttagaaacat 239
           | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| 
Sbjct: 380 aattgacaacttggatattttgaaggggcaatatggaaagccctgcaactttagaaacaa 439

                                                                       
Query: 240 atgagcctgataacattgcttaaccagttgtgaactcacataactgtgtttagagttagc 299
           || ||||||| ||| ||||||||  ||||||||||||||||||||||| |||||||||||
Sbjct: 440 ataagcctgaaaactttgcttaattagttgtgaactcacataactgtgcttagagttagc 499

                                                                       
Query: 300 atttttt--ccagtttcttaacttagccataaagttactgtgaaaacataatctatttgt 357
           |||||||  |||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 500 attttttttccagtttcctaacttagccataaagttactgtgcaaacataatctatttgt 559

                                                                       
Query: 358 ctg----ttttttgctgtttcattttaaaattttt-ggaaggttttggagacagggtctt 412
           |||    |||||||| ||||||||||||| ||||| ||||| ||||||||||||| ||||
Sbjct: 560 ctggtttttttttgcggtttcattttaaatttttttggaagtttttggagacaggttctt 619

                                                                       
Query: 413 cctt-gtagcccagtctaacccagaaaccccctcagttctccagcctctgcgtttcagaa 471
            ||| |||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 620 actttgtagtccagtctaacccagaacccccctcagttctccaacctctgcatttcagaa 679

                                           
Query: 472 tcctgggattgcaagctcaagctacaatgccc 503
           |||||||||||||||||||||||||| |||||
Sbjct: 680 tcctgggattgcaagctcaagctacagtgccc 711


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 914
Length adjustment: 10
Effective length of query: 497
Effective length of database: 904
Effective search space:   449288
Effective search space used:   449288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)