Query= MSMg01no401_l04.b1 MSMg01no401_l04.b1 CHROMAT_FILE:
MSMg01no401_l04.b1 PHD_FILE: MSMg01no401_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:23 2005
(645 letters)
>mm_chrX_84854122_84855166
Length = 1045
Score = 859 bits (444), Expect = 0.0
Identities = 455/459 (99%)
Strand = Plus / Minus
Query: 187 atgaatatttagttatgctgatgagttgcaaagaacataaacaattgatttttataagag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 atgaatatttagttatgctgatgagttgcaaagaacataaacaattgatttttataagag 986
Query: 247 ttatggtaaatgtttattttacacttgaatgtactcaacattagctgaatatttggaaaa 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 ttatggtaaatgtttattttacacttgaatgtactcaacattagctgaatatttggaaaa 926
Query: 307 gaacacatctaagtatgtctgtgaagggtttctcaaggattagcagaataggaaagaacc 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 gaacacatctaagtatgtctgtgaagggtttctcaaggattagcagaataggaaagaacc 866
Query: 367 tgttctgtatgtaagtgcacgtggtattactgtatatgctcagagaagggatggtcaaaa 426
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tgttctgtatgtaagtgcaagtggtattactgtatatgctcagagaagggatggtcaaaa 806
Query: 427 aaagaatgagagagaaaatttatgtttggagctgagtcaggcttactgttgagtgtcttt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 aaagaatgagagagaaaatttatgtttggagctgagtcaggcttactgttgagtgtcttt 746
Query: 487 tgacaaagcatgttgaaactgggttgctctactacaccctacctaccaggaaacctctca 546
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgacaaagcatgttgaaactggcttgctctactacaccctacctaccaggaaacctctca 686
Query: 547 nactatgaacccaaaatgaacaatttgttctttcatctgtctatacctagtatgtcaatg 606
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 685 aactatgaacccaaaatgaacaattcgttctttcatctgtctatacctagtatgtcaatg 626
Query: 607 caactatttgaaacaaattaatacaaaaagattcagtta 645
|||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caactatttgaaacaaattaatacaaaaagattcagtta 587
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no401_l04.g1 MSMg01no401_l04.g1 CHROMAT_FILE:
MSMg01no401_l04.g1 PHD_FILE: MSMg01no401_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:23 2005
(581 letters)
>mm_chrX_84697249_84698230
Length = 982
Score = 1087 bits (562), Expect = 0.0
Identities = 577/582 (99%), Gaps = 1/582 (0%)
Strand = Plus / Plus
Query: 1 attctctacatatttttatattgaaatataatatatataatggaatttcatgttttctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctctacatatttttatattgaaatataatatatataatggaatttcatgttttctgg 260
Query: 61 tttgttttgatgtactttgttaggagtgcctagaacactcaattcaacttaggacacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgttttgatgtactttgttaggagtgcctagaacactcaattcaacttaggacacatt 320
Query: 121 tatgattctatgctgaatataaatacaagatcgatgaaaaaatcaatactaaatctgaac 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 tatgattctatgctgaatataaatacaagatcaatgaaaaaatcaatactaaatctgaac 380
Query: 181 taattatataccactatatattcttatgggacaaaagagtgcatattcaaaaatataaat 240
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 aaattatataccactatatattcttatgggacaaaacagtgcatattcaaaaatataaat 440
Query: 241 atatctgtgttttatctttctacatgtcagtgaacatcatactgtattgcaatacaggga 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatctgtgctttatctttctacatgtcagtgaacatcatactgtattgcaatacaggga 500
Query: 301 ttatataacacaatttaattttgcctacttcctatcctatagtaatttaaatttcatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttatataacacaatttaattttgcctacttcctatcctatagtaatttaaatttcatttc 560
Query: 361 attttttt-ggcctagacttttaatcattccagaaaatggatgattttctactatttttc 419
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attttttttggcctagacttttaatcattccagaaaatggatgattttctactatttttc 620
Query: 420 tatttattatccaaaataaatgtttccaggattagaattcaaatgatttttaagaaaagt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatttattatccaaaataaatgtttccaggattagaattcaaatgatttttaagaaaagt 680
Query: 480 aatgtcattttcacaagtaaaatgggactgatatggcccaaagcaagccaaaagcagaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatgtcattttcacaagtaaaatgggactgatatggcccaaagcaagccaaaagcagaga 740
Query: 540 ttgccagtaaaaggcttaatttgtaggagagtaggtgtcaga 581
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttgccagtaaaaggcttaatttgtaggagagtaggtgtcaga 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space: 555012
Effective search space used: 555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
