Query= MSMg01no403_c15.b1 MSMg01no403_c15.b1 CHROMAT_FILE:
MSMg01no403_c15.b1 PHD_FILE: MSMg01no403_c15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:21 2005
(354 letters)
>mm_chrX_100807203_100807958
Length = 756
Score = 632 bits (327), Expect = 0.0
Identities = 345/352 (98%), Gaps = 2/352 (0%)
Strand = Plus / Plus
Query: 4 ggaattctacattgccacttgaaaatagtttgaaaaataaatctgtaaggtccgtcccac 63
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctacatgggtacttgaaaatagtttgaaaaataaatctgtaaggtccgtcccac 263
Query: 64 cttttcacctccagaaagagctcatcactaaagtaacctccattttgggtttctttcggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttttcacctccagaaagagctcatcactaaagtaacctccattttgggtttctttcggt 323
Query: 124 tcagggaacaagactgagcaagcctttataaccctggcccagatcttcgctctaagcccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tcagggaacaagactgagcaagcctttataaccctggcccagatcttcgctctaagcccc 383
Query: 184 attagggtggggttttgttgtttttaatgcttgctttggtgagagcagaccttggactgt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attagggtggggttttgttgtttttaatgcttgctttggtgagagcagaccttggactgt 443
Query: 244 accctgaggcagagttggntttatttcatttcactttctttcattttacttttcagtgta 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accctgaggcagagttggttttatttcatttcactttctttcattttacttttcagtgta 503
Query: 304 gcaaaatgaatcacaacaaattctttttt--gggggggggttggttttggtt 353
| ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 504 gtaaaatgaatcacaacaaattctttttttggggggggggttggttttggtt 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 756
Length adjustment: 9
Effective length of query: 345
Effective length of database: 747
Effective search space: 257715
Effective search space used: 257715
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_c15.g1 MSMg01no403_c15.g1 CHROMAT_FILE:
MSMg01no403_c15.g1 PHD_FILE: MSMg01no403_c15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:21 2005
(528 letters)
>mm_chrX_100985748_100986672
Length = 925
Score = 990 bits (512), Expect = 0.0
Identities = 523/528 (99%), Gaps = 3/528 (0%)
Strand = Plus / Minus
Query: 1 cctagggagcattaaaaatactggcaccctggctctatctcatcaattgaatcatcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 cctagggagcattaaaaatactggcaccctggctctatctcatcaattgaatcatcatct 798
Query: 61 ccaagggaggggttatagtttttaaaagctccctaggtgattctaatagatagtcaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 ccaagggaggggttatagtttttaaaagctccctaggtgattctaatagatagtcaagat 738
Query: 121 taagaatcattgctctggggaaaaagagcctgacatctgtgagggagcttgaaggacaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taagaatcattgctctggggaaaaagagcctgacatctgtgagggagcttgaaggacaga 678
Query: 181 ctcccagtgaagcagcttttacagacatgtctcctttcagccagatcatttagcacgtct 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ctcccagtgaagcagcttttacagacatgtctcctttcagccagatcatttagcacgtcc 618
Query: 241 tccagtctggcatgtgaaatccctaagagttaggttcactgttatcttccaaagtcaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tccagtctggcatgtgaaatccctaagagttaggttcactgttatcttccaaagtcaaat 558
Query: 301 tgatcttcttgttactgctttcacatcattacatctaagaaatagtttactttcagccat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgatcttcttgttactgctttcacatcattacatctaagaaatagtttactttcagcca- 499
Query: 361 cttcttcttctttttaacatcataaagacctctaaagagactgcctgtctctagtgggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 --tcttcttctttttaacatcataaagacctctaaagagactgcctgtctctagtgggaa 441
Query: 421 gcctataaataatttgacccagtttctggatttttctcaggggtccactcacaaggcata 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 gcctataaataatttgacccagtttctggatttttctcagtggtccactcacaaggcata 381
Query: 481 tctctctagctccctttcaggagctagtggtgagtatttaaaactgtc 528
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctctctagctccctttcaggagctagtggtgagtatttaaaactgtc 333
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 925
Length adjustment: 10
Effective length of query: 518
Effective length of database: 915
Effective search space: 473970
Effective search space used: 473970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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