Query= MSMg01no405_e22.b1 MSMg01no405_e22.b1 CHROMAT_FILE:
MSMg01no405_e22.b1 PHD_FILE: MSMg01no405_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:15 2005
(319 letters)
>mm_chrX_72844122_72844840
Length = 719
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%)
Strand = Plus / Minus
Query: 8 gaattctttgtatctgacactcccattttcagatggagttgtccgagtagcaaatctttt 67
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gaattctttgtaacagacactcccattttcagatggagttgtccgagtagcaaatctttt 321
Query: 68 catccattacaagggcaatgcaaacacctactgcagcagtaaggcatgtcagtttatatc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catccattacaagggcaatgcaaacacctactgcagcagtaaggcatgtcagtttatatc 261
Query: 128 acatggggatcaattgctcctgaatgtgctaagtttagttttaattacatgtctgtctta 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acatggggatcaattgctcctgaatgtgctaagtttagttttaattacatgtctgtctta 201
Query: 188 gtcagggtttctattcctgcacaaacatcatggccaagaagcaagttggggaggaaaggg 247
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gtcagggtttctattcttgcacaaacatcatggccaagaagcaagttggggaggaaaggg 141
Query: 248 tttatttggcttatacttccatactgctgtttatcaccaaagaagtcaggactggaaatc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 140 tttatttggcttatacttccatactgctgtttatcaccaaagaagtcaggactggaactc 81
Query: 308 aagcaggtcagg 319
||||||||||||
Sbjct: 80 aagcaggtcagg 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_e22.g1 MSMg01no405_e22.g1 CHROMAT_FILE:
MSMg01no405_e22.g1 PHD_FILE: MSMg01no405_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:15 2005
(358 letters)
>mm_chrX_72657155_72657912
Length = 758
Score = 632 bits (327), Expect = 0.0
Identities = 348/359 (96%), Gaps = 8/359 (2%)
Strand = Plus / Plus
Query: 1 tctaagtaagttctatagggagatgagaactgcaggagcctggtttgttcattcgttcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tctaagtaagttctatagggagatgagaactgcaggagcctggtttgttcattcgttcat 266
Query: 61 tc-tctctctctctctctctctctctctctctctctctctctctctctctctctctctct 119
|| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tcat-------tctctctctctctctctctctctctctctctctctctctctctctctct 319
Query: 120 ctctcctctcttgtatttacaaaacagtattcaaaggtagtgtgttagcattacaaaatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctctcctctcttgtatttacaaaacagtattcaaaggtagtgtgttagcattacaaaatg 379
Query: 180 caaaaaagtgtatctaaagacacaattttagtttacaaattaaaaggtcaaaaatatctc 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaagaagtgtatctaaagacacaattttagtttacaaattaaaaggtcaaaaatatctc 439
Query: 240 tctgtgtttacaattctcagagttttgagaggcaaggaaactctccataatagacttctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 440 tctgtgtttacaattctcagagttttgagaggcaaggaaactctccataatagtcttctg 499
Query: 300 tccagcttcggatctcataacttcacatgcatttttcatgaatagaatcttgtataaac 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 500 tccagcttcggatctcataacttcacatgcatttttcatgaatagaatcttgtagaaac 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 98
Number of extensions: 32
Number of successful extensions: 32
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
