NTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCAGGATAGCTCCAAAGTGAGTCCCTGTCTCTAAAATCCCCAAAA
CACTAAGAAGGCATAGTAACAAAATAGTACAGAACTCACAGTTTGAATTT
TGTCCTCCATACATTTACAATTTTATTGTCATTAACACTGAACTTATACC
AATCATATGCAACATTCTTTTAAATTTTATTTTAAATGCTAATTTTAAAA
TGTACATCATGTTAACAATCATAAATAAGCAAGATTAACTTATAAATCTA
AGGTGTCACAGAACCCTATTTTTTTCCCAGTTAGGATTTTGTTGATTTTG
CTCAGTTCAGTCTGCTATCCCTCTCACACATATACTCTTTTGAAGCTATC
AACTGTATTCTTAATATCACATAGAACAGTCAAACAAAGGGGTCCTTCTA
TTCTTCTAAGAAGATTACGTGTATAAACATCATTTTATATTATATTAGTA
ACTATCTCAATGTTCTCAATTCTTTTTATCTGATTGAATAGTTCAGATGT
CTCTAAAAATAGCCTTTTTGGTGATATTAAAAAAAATTAAGAGAAACTTT
AAAATACAAACCTGCCCCAAAAGTAGCTAACTCCTGGTTAAGTGTCATTT
GAAGATTTCATGACTCACCCCTTCAATGTTTATCCCTCTCCCTCTCCAAA
GCTGAAGCACATAAGGGTGAAGTTGACATT

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACCTAAACATGAT
AAAAGCAATCTACAGCAAGCCAGTAGCCAACATCAAAGTAAATGGAGAGA
AGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACTT
TCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTCG
ACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAGGAAGTCAAAA
TATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAAT
TCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTGG
ATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAATA
AACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACA
AATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATCT
GTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCA
GAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATATTGTA
AAAATGGCTATCTTGCCAAAAGCAATCTACAGATTCAATGGCATCCCCAT
CAAAATTCCAACTCAATTCTTCCATGAATTAGAAGGAGCAT

Query= MSMg01no407_m07.b1 MSMg01no407_m07.b1 CHROMAT_FILE:
MSMg01no407_m07.b1 PHD_FILE: MSMg01no407_m07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:30 2005
         (628 letters)



>mm_chrX_39151004_39152031
          Length = 1028

 Score = 1191 bits (616), Expect = 0.0
 Identities = 625/628 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtgagtccctgtctctaaaatccccaaaacactaagaaggcatagtaacaaaatagtaca 60
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtgagtcgctgtctctaaaatccccaaaacactaagaaggcatagtaacaaaatagtaca 260

                                                                       
Query: 61  gaactcacagtttgaattttgtcctccatacatttacaattttattgtcattaacactga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaactcacagtttgaattttgtcctccatacatttacaattttattgtcattaacactga 320

                                                                       
Query: 121 acttataccaatcatatgcaacattcttttaaattttattttaaatgctaattttaaaat 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 acttataccaatcatatgcaacattcttttacattttattttaaatgctaattttaaaat 380

                                                                       
Query: 181 gtacatcatgttaacaatcataaataagcaagattaacttataaatctaaggtgtcacag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacatcatgttaacaatcataaataagcaagattaacttataaatctaaggtgtcacag 440

                                                                       
Query: 241 aaccctatttttttcccagttaggattttgttgattttgctcagttcagtctgctatccc 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccctatctttttcccagttaggattttgttgattttgctcagttcagtctgctatccc 500

                                                                       
Query: 301 tctcacacatatactcttttgaagctatcaactgtattcttaatatcacatagaacagtc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctcacacatatactcttttgaagctatcaactgtattcttaatatcacatagaacagtc 560

                                                                       
Query: 361 aaacaaaggggtccttctattcttctaagaagattacgtgtataaacatcattttatatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacaaaggggtccttctattcttctaagaagattacgtgtataaacatcattttatatt 620

                                                                       
Query: 421 atattagtaactatctcaatgttctcaattctttttatctgattgaatagttcagatgtc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atattagtaactatctcaatgttctcaattctttttatctgattgaatagttcagatgtc 680

                                                                       
Query: 481 tctaaaaatagcctttttggtgatattaaaaaaaattaagagaaactttaaaatacaaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tctaaaaatagcctttttggtgatattaaaaaaaattaagagaaactttaaaatacaaac 740

                                                                       
Query: 541 ctgccccaaaagtagctaactcctggttaagtgtcatttgaagatttcatgactcacccc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgccccaaaagtagctaactcctggttaagtgtcatttgaagatttcatgactcacccc 800

                                       
Query: 601 ttcaatgtttatccctctccctctccaa 628
           ||||||||||||||||||||||||||||
Sbjct: 801 ttcaatgtttatccctctccctctccaa 828


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space:   629124
Effective search space used:   629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)