Query= MSMg01no409_e01.b1 MSMg01no409_e01.b1 CHROMAT_FILE:
MSMg01no409_e01.b1 PHD_FILE: MSMg01no409_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:32 2005
(504 letters)
>mm_chrX_84673764_84674667
Length = 904
Score = 679 bits (351), Expect = 0.0
Identities = 375/383 (97%), Gaps = 2/383 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttaattaatg-tacgatgctgtgtgttgagaattttgagatttctttcaacct 62
||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||
Sbjct: 382 ggaattcttaattaatgaga-gatgctgtgtgttgagaatttcaagatttctttcaacct 324
Query: 63 ttagaaatatgaagattatctgtttttttggttttttctgaggaaaatccttaagactta 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttagaaatatgaagattatctgtttttttggttttttctgaggaaaatccttaagactta 264
Query: 123 gggtctctcacttttgcttccttcctacaaatgcttcaaactctctgctctatcttaaaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gggtctctcacttttgcttccttcctacaaatgcttcaaactctctgctctatcttaaaa 204
Query: 183 caacaaactggattgtttcaggatttccatgggactctcttggccaataattcaattact 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 caacaaactggattgtttcaggatttccatgggactctcttggccaataattcaattact 144
Query: 243 tgcaacctgttcccaatactgaaaacctcacttggttagtctgttgtgagcctatatctc 302
|||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 143 tgcaacctgttcccaatactgaaaacctcatttggttagcctgctgtgagcctatatctc 84
Query: 303 ttattattagaagactttattaacatcagcttcaaatattttagtaagtttctactgcac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ttattattagaagactttattaacatcagcttcaaatattttagtaagtttctactgcac 24
Query: 363 tgggttctgtatcatttctccaa 385
|||||||||||||||||||||||
Sbjct: 23 tgggttctgtatcatttctccaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_e01.g1 MSMg01no409_e01.g1 CHROMAT_FILE:
MSMg01no409_e01.g1 PHD_FILE: MSMg01no409_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:32 2005
(551 letters)
>mm_chrX_84521382_84522333
Length = 952
Score = 1038 bits (537), Expect = 0.0
Identities = 549/553 (99%), Gaps = 2/553 (0%)
Strand = Plus / Plus
Query: 1 cagatatccaggaacattgaagcaagatgaaagaaagagaaaataccaagcaacataaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagatatccaggaacattgaagcaagatgaaagaaagagaaaataccaagcaacataaat 259
Query: 61 aggctaggaaactaagaaatatcttctctttttaatttttttt-aattaggtattttctt 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 260 aggctaggaaactaagaaatatcttctctttttaatttttttttaattaggtattttctt 319
Query: 120 catttacattccaaatggggctcagagctaaacaaagaaatatcttcttaaacagttagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catttacattccaaatggggctcagagctaaacaaagaaatatcttcttaaacagttagg 379
Query: 180 caaagtactgcctgaattttaaagcaatttttatactaccattattatattgttcattta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaagtactgcctgaattttaaagcaatttttatactaccattattatattgttcattta 439
Query: 240 agtaacccagtaaaacttaactaagcactagttaagactta-ctatagatgggtccaaag 298
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 440 agtaacccagtaaaacttaactaagcactagttaagacttaactatagatgggtccaaag 499
Query: 299 gaatacctgagtatatggatctatattctgtctttcatctggaaacaatcatcatcatga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaatacctgagtatatggatctatattctgtctttcatctggaaacaatcatcatcatga 559
Query: 359 atcagaatctgaattttatcaagatcttcaggacccaaattcaaatctcagaacacacat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcagaatctgaattttatcaagatcttcaggacccaaattcaaatctcagaacacacat 619
Query: 419 ggtagcttactaccactgtaactccctttccaggggatcttatgtcctcttctggcttgt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggtagcttactaccactgtaactccctttccaggggatcttatgtcctcttctggcttgt 679
Query: 479 ttagttaccagggattcatactatgcacagacatacatgaaactaagacactgatataca 538
|||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 680 ttagttaccaggcattcatactatgcacagacatacatgaaactaaaacactgatataca 739
Query: 539 taaaataaagatg 551
|||||||||||||
Sbjct: 740 taaaataaagatg 752
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 952
Length adjustment: 10
Effective length of query: 541
Effective length of database: 942
Effective search space: 509622
Effective search space used: 509622
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
