NNAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTATCTAAGGAAACCAAATGGCTGAGAAGCACCTGAAAATG
TGTTCAGCATCCTTAATCATCAGGGAAATGCAAATCAAAACAAATCTGAG
ATTCCATCTCACACCAGTCAGAATGGCTAAGATAAAAAATTCAGGTGACA
GCAGATGCTGGGAAGCATGTGGAGAAATAGGAATACTCCTCCATTATTTG
TGGGATTGTAAGCTTGTACAACCACTCTGGAAATCAGTCTGGAGGTTCCT
CAGAAAATTGGACATAGTACTACTGGAGGATCCAGCAATACCTCTCCTGG
GCATATATCCATAAGATGTTCCAACTGGTAAGTAAGACACATGCTCCACT
ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAG
ATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAA
TGGAGTACTAGTCAGCTATTAAAAAGATTGAATTTATGAAATTCTTAGGA
AAATGGTGGGACCTGGAGGGCATTATCTTGAGTGAGGTAACCCAATCACA
AAGGAACTCAGTGATAAGTGGATATTAGCCCAGAAACTTATGATACCCAA
GATAAAAGATACAATTTGCCAAACCCCTGAGAATCATGAAGAACTAAGAC
CCATGTGGGACCTTTCTCCCTTCTTAAAAATGGGACCAAAAACCCCCTGG
AAGGGGG

NNNCCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTCACAAGGAGTCATGGG
CACTACTTTTAGGATTTATTTCATTTTTACAAAATAGCAGAAGGTGAGTA
TAATAAAGTTCCTTCTTCTCTTTGACAGTGTGTTATGTTGAATTGTTGCA
AGTATCTTGCAATCATGAAGGGAAAACAAAAAATAGCTGGAAAGCACCAA
CTCTGAATCCTGTCACTATGAACCCCAGGAACGCTTAGCTATAAAGTTTG
TATCAATGTCAGATCAATAAATAATTATAATTAATAAATAAATAATAAAT
CCCTATTGTGTTGATCATCTTTTAGCTGCTTATTCTGTTACCTGGTACTA
AATACTCTAATAGTGTTTCAAGAATTTAGGTTTACTGAATTACAGTAATT
ATGTAACATAAAGCTGAGACACTTGTACAATTGAGTTATACCATAACTAA
TTCCTCTATTTCTTATCTATCTATCTATCTATCTATCTATCTATCTATCT
ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTGTCTGG
CTGTCTGGCTGTCTGTCTGTCTGTCTATCTATCTATCTATCTATCATTAT
AAATATCTAATTAAATGTCACACATGTTCCTCATATCAACAATATGGTTT
TTGAAATCATTGGAAAAAACTTGATGGATTATCTCCGCCCCCCTTAATTA
AATATGN

Query= MSMg01no410_h03.g1 MSMg01no410_h03.g1 CHROMAT_FILE:
MSMg01no410_h03.g1 PHD_FILE: MSMg01no410_h03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:11 2005
         (517 letters)



>mm_chrX_56276989_56277905
          Length = 917

 Score =  897 bits (464), Expect = 0.0
 Identities = 494/504 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   attcacaaggagtcatgggcactacttttaggatttatttcatttttacaaaatagcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 attcacaaggagtcatgggcactacttttaggatttatttcatttttacaaaatagcaga 842

                                                                       
Query: 61  aggtgagtataataaagttccttcttctctttgacagtgtgttatgttgaattgttgcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aggtgagtataataaagttccttcttctctttgacagtgtgttatgttgaattgttgcaa 782

                                                                       
Query: 121 gtatcttgcaatcatgaagggaaaacaaaaaatagctggaaagcaccaactctgaatcct 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 781 gtatcttgcaatcatgaagggaaaacaaaaaatagctgcaaagcaccaactctgaatcct 722

                                                                       
Query: 181 gtcactatgaaccccaggaacgcttagctataaagtttgtatcaatgtcagatcaataaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gtcactatgaaccccaggaacgcttagctataaagtttgtatcaatgtcagatcaataaa 662

                                                                       
Query: 241 taattataattaataaataaataataaatccctattgtgttgatcatcttttagctgctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 taattataattaataaataaataataaatccctattgtgttgatcatcttttagctgctt 602

                                                                       
Query: 301 attctgttacctggtactaaatactctaatagtgtttcaagaatttaggtttactgaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attctgttacctggtactaaatactctaatagtgtttcaagaatttaggtttactgaatt 542

                                                                       
Query: 361 acagtaattatgtaacataaagctgagacacttgtacaattgagttataccataactaat 420
           |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 541 acagtaattatgtaacataaagctgagacacttgtataattgaattataccataactaat 482

                                                                       
Query: 421 tcctctatttcttatctatctatctatctatctatctatctatctatctatctatctatc 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||| ||
Sbjct: 481 tcctctatttcttatctatctatctatctatctatctatctatctgtctgtctgtctgtc 422

                                   
Query: 481 tatctatctatctatctatctatc 504
           | ||| ||| ||||||||||||||
Sbjct: 421 tgtctgtctgtctatctatctatc 398


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space:   459849
Effective search space used:   459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)