NNAATGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACAGCTTAGCAATCTCGAATGGCTGAGAAGCACTAAAA
GAAATGTTCAAAGTCCCTAGTGATCAGAATAATGCAAATCAAAACAACTC
TGAGATTCAACCTTACAGCAGTCAGAATGGCTAAGATCAAAAACTCAGGT
GACAGCACATGTTGGCAAGGATGTGGAGAAAAAGGAACACTCCTCCATTG
TTGGTGGGATTGCAAACTTGTTCAACCACTCTGGAAATCAATCTGGTGAT
TCCTGTGAAAATTGGAAGATCCATCTATGCCACTACTAGGCATATACTCA
AAAGATGCCCCACCATGCCACAGGAGTATGTGTTTCATTATTTTCATAGT
GACCTTACTTGTGATAGCCAGAAGCTGGAAACAACCCTGATGTCCTCAAC
AGAAGAATGGATACAGAAAATGTGGTTCATTTACACAATGGAGTACTACT
CAGCTATTGAGAATGAGGACATCCTGAGTTTTGCAGGCAAACGGATGGAA
CTAGAAAATATCATCCTGACTGAGGTAACTTGGGCTCAAAAGTACATGCA
TGGTAAGTGGATGTTAGCCCCCAAGGCACAGAATACCCAGGATACAATCC
ACAGAACTCAAGAAGGTTAACAAGCCACATGGCCTAAGCGAGGATGCCTC
AATCCCACTTGGAACGGAGAACATAGGAACTCCTGAGGGC

TTCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTTTATATGTATGCCCACAT
TTATGATGAGGTTTGTTTTTCAACTGACAGCTTTTATACATTGAAGACTT
GAAAAGATTTCAGCATTGACAACCTCTTTGATAACAAATGATAATTCAAT
ATATCCATGATGAAAAAAATACAGAGGCCAAGTTCTTTTCTTTAAGAAAT
AAGATCTTCCTATTTCTTTTACTCAGAATGTTCTTCTCCCAATATGGCTG
GTGCTGATTTTTAAGGACAAGTGTGTCTTATGATTAGAAAAGCACCCTAG
CTACAGCACAATTTCCCCTTGCCTTTTGCATTTCCATTTTCTTTAACTTT
ACTATGACAGATTTTCCATTTTCAGTTCTTTGTTTTCTTTCATCTCTGAG
TTCTCTAATCCATGAGGAACTTTGATCTCTGGAAAGTTTCTTTCCAATTC
AGGGCAGTCATAGGGTTTCTCTCCTATGTGAGTTCTCTGATGCACAGTGA
GTTTGGACTTCTCTCTGAAGGCTCTGCTACACTTATCACATTGATACGGT
TTCTCTCCTGTATGGATTCTTTGATGACTAATGAGATATGATTTTTGGGA
GAAAGATTTCTCACATATATTACATTCATAGGGTTTCTCTCCCGCCCGAT
CCCCCTGATGAATAACGACATATGACTCCTGTAACA

Query= MSMg01no410_i05.g1 MSMg01no410_i05.g1 CHROMAT_FILE:
MSMg01no410_i05.g1 PHD_FILE: MSMg01no410_i05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:16 2005
         (542 letters)



>mm_chrX_20658189_20659131
          Length = 943

 Score = 1004 bits (519), Expect = 0.0
 Identities = 537/543 (98%), Gaps = 1/543 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttttatatgtatgcccacatttatgatgaggtttgtttttcaactgacagcttttatac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttatatgtatgcccacatttatgatgaggtttgtttttcaactgacagcttttatac 260

                                                                       
Query: 61  attgaagacttgaaaagatttcagcattgacaacctctttgataacaaatgataattcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgaagacttgaaaagatttcagcattgacaacctctttgataacaaatgataattcaa 320

                                                                       
Query: 121 tatatccatgatgaaaaaaa-tacagaggccaagttcttttctttaagaaataagatctt 179
           |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatatccatgataaaaaaaagtacagaggccaagttcttttctttaagaaataagatctt 380

                                                                       
Query: 180 cctatttcttttactcagaatgttcttctcccaatatggctggtgctgatttttaaggac 239
           |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 381 cctatttcttttactcagaatgttcttctctcaatatggctggtgctgatctttaaggac 440

                                                                       
Query: 240 aagtgtgtcttatgattagaaaagcaccctagctacagcacaatttccccttgccttttg 299
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtgtgtcatatgattagaaaagcaccctagctacagcacaatttccccttgccttttg 500

                                                                       
Query: 300 catttccattttctttaactttactatgacagattttccattttcagttctttgttttct 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catttccattttctttaactttactatgacagattttccattttcagttctttgttttct 560

                                                                       
Query: 360 ttcatctctgagttctctaatccatgaggaactttgatctctggaaagtttctttccaat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcatctctgagttctctaatccatgaggaactttgatctctggaaagtttctttccaat 620

                                                                       
Query: 420 tcagggcagtcatagggtttctctcctatgtgagttctctgatgcacagtgagtttggac 479
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 621 tcagggcagtcatagggtttctctcctatgtgagttctttgatgcacagtgagtttggac 680

                                                                       
Query: 480 ttctctctgaaggctctgctacacttatcacattgatacggtttctctcctgtatggatt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctctctgaaggctctgctacacttatcacattgatacggtttctctcctgtatggatt 740

              
Query: 540 ctt 542
           |||
Sbjct: 741 ctt 743


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 943
Length adjustment: 10
Effective length of query: 532
Effective length of database: 933
Effective search space:   496356
Effective search space used:   496356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)