Query= MSMg01no410_n23.b1 MSMg01no410_n23.b1 CHROMAT_FILE:
MSMg01no410_n23.b1 PHD_FILE: MSMg01no410_n23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:44 2005
(525 letters)
>mm_chrX_95341782_95342706
Length = 925
Score = 1002 bits (518), Expect = 0.0
Identities = 524/526 (99%), Gaps = 1/526 (0%)
Strand = Plus / Plus
Query: 1 cttcccccctctctaca-cattccctctttcctttggccattttcctttcagtgttctct 59
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cttcccccctctctacaacattccctctttcctttggccattttcctttcagtgttctct 259
Query: 60 ttcactgttggtctacagaaaaaccgttctcctggccctaagacatatattcattctatt 119
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 260 ttcactgttggtctacagaaaaacagttctcctggccctaagacatatattcattctatt 319
Query: 120 ctaccaccttgccccttcattcaatacccttggactaaatcattcaaaagctttggtaga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctaccaccttgccccttcattcaatacccttggactaaatcattcaaaagctttggtaga 379
Query: 180 tgtgaggttgtaatgactattcaaaaataaggtctttgggactagagagatggctcagtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtgaggttgtaatgactattcaaaaataaggtctttgggactagagagatggctcagtg 439
Query: 240 gttaagagcaccgactgctcttccaaaggtccggagttcaaatcccagcaaccacatggt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gttaagagcaccgactgctcttccaaaggtccggagttcaaatcccagcaaccacatggt 499
Query: 300 ggctcacaaccatccataatgagatctgacgccctcttctggtgcatatgaagacaacta 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggctcacaaccatccataatgagatctgacgccctcttctggtgcatatgaagacaacta 559
Query: 360 cagtgtacttagatataataataaataaatcttttaaaaaataaaaaaataaggtcttca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagtgtacttagatataataataaataaatcttttaaaaaataaaaaaataaggtcttca 619
Query: 420 aagtatccacatttcagcaccctacactagaatactgagaattacccattttacagttgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aagtatccacatttcagcaccctacactagaatactgagaattacccattttacagttgg 679
Query: 480 acagcttttgaataactttgctattttttttttaatcctaaagagt 525
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acagcttttgaataactttgctattttttttttaatcctaaagagt 725
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space: 471225
Effective search space used: 471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_n23.g1 MSMg01no410_n23.g1 CHROMAT_FILE:
MSMg01no410_n23.g1 PHD_FILE: MSMg01no410_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:44 2005
(458 letters)
>mm_chrX_95496101_95496958
Length = 858
Score = 862 bits (446), Expect = 0.0
Identities = 455/458 (99%)
Strand = Plus / Minus
Query: 1 actggattttattcaataggtacaggaacaaagagtagttggtgttgttacaatcaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 658 actggattttattcaataggtacaggaacaaagagtagttggtgttgttacaatctatga 599
Query: 61 gaattagtctgttgccactactctgtacaatgaccaaaatctcagtgaggtgataactta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaattagtctgttgccactactctgtacaatgaccaaaatctcagtgaggtgataactta 539
Query: 121 tgggccaaaacagattcatttgcagcaagatcaatatgcaaagacactgtgaggaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tgggccaaaacagattcatttgcagcaagatcaatatgcaaagacactgtgaggaaggtt 479
Query: 181 cattgagacaaaattatttctatttctttgaattgtgccaatcagaacttgcttgtcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 478 cattgagacaaaattatttctatttctttgaattgtgccaatcagaacttgctagtcatt 419
Query: 241 ttcatatcttctacagttatgaggcatctgcttgaggaagagagtatgcattcccacttg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 418 ttcatatcttctacagttatgaggcatctgcttgaggaagagagtatgcattcccatttg 359
Query: 301 tcctcaggagcccggtaacatgctgtctgtgtgaccatagtggctcaagccgcaccaggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tcctcaggagcccggtaacatgctgtctgtgtgaccatagtggctcaagccgcaccaggt 299
Query: 361 gttctgagcaatctgcctgaagagcgtgactgcactaaacataattgaaatcggattcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gttctgagcaatctgcctgaagagcgtgactgcactaaacataattgaaatcggattcca 239
Query: 421 ttcattctgtgggggatcctctgttgtctctctgcagc 458
||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ttcattctgtgggggatcctctgttgtctctctgcagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
