Query= MSMg01no417_d16.b1 MSMg01no417_d16.b1 CHROMAT_FILE:
MSMg01no417_d16.b1 PHD_FILE: MSMg01no417_d16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:03 2005
(541 letters)
>mm_chrX_133428950_133429891
Length = 942
Score = 1015 bits (525), Expect = 0.0
Identities = 537/541 (99%), Gaps = 1/541 (0%)
Strand = Plus / Minus
Query: 2 atatttctcattcagaagatctcaacttaaagggttaggggctcagtactcttcatct-a 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 590 atatttctcattcagaagatctcagcttaaagggttaggggctcagtactcttcatctga 531
Query: 61 gtatcttgatcagtgggatatttcacaaaagcaattgatgctcagtgagtgcaagataga 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gtatctggatcagtgggatatttcacaaaagcaattgatgctcagtgagtgcaagataga 471
Query: 121 tgagcaagtttgtgttttgtccctgttgctaatagtgatatgatcatgggtagcttctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tgagcaagtttgtgttttgtccctgttgctaatagtgatatgatcatgggtagcttctcc 411
Query: 181 tttagggtcactgtcattttcctcaagaaaaaaatatgtgagttgagaggctctattttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tttagggtcactgtcattttcctcaagaaaaaaatatgtgagttgagaggctctattttt 351
Query: 241 gtgaaagtgatctctattgaaagatgagatcttagtggcaaatgagaagccaaataaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gtgaaagtgatctctattgaaagatgagatcttagtggcaaatgagaagccaaataaagg 291
Query: 301 gatacataaattctcatggacaagtacctaggtatactctgcagtccaaaggtcctcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gatacataaattctcatggacaagtacctaggtatactctgcagtccaaaggtcctcagc 231
Query: 361 aattgaggaagctaatgcgatactaaaaaggctgtcctggaactctctttctctgtatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 aattgaggaagctaatgcgatactaaaaaggctgtcctggaactctctttctctgtatat 171
Query: 421 cagggtggcctcgaactcacagatatctacctgcttgtccctcccgagtcctgggattaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 cagggtggcctcgaactcacagatatctacctgcttgtccctcccgagtcctgggattaa 111
Query: 481 aggcatgtgacactactgcccagggagggcattttcttaattagcgattgatatgttggg 540
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110 aggcatgtgacactactgcccagggagggcattttcttaattagtgattgatatgttggg 51
Query: 541 g 541
|
Sbjct: 50 g 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 942
Length adjustment: 10
Effective length of query: 531
Effective length of database: 932
Effective search space: 494892
Effective search space used: 494892
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_d16.g1 MSMg01no417_d16.g1 CHROMAT_FILE:
MSMg01no417_d16.g1 PHD_FILE: MSMg01no417_d16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:03 2005
(414 letters)
>mm_chrX_133215312_133216124
Length = 813
Score = 746 bits (386), Expect = 0.0
Identities = 407/414 (98%), Gaps = 1/414 (0%)
Strand = Plus / Plus
Query: 1 agaagcctccagaggtttctgaagcaagctgatagaaatgtgtagtctgtattgataaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaagcctccagaggtttctgaagcaagctgatagaaatgtgtagtctgtattgataaaa 260
Query: 61 taagtaacccaaatcagatgcagggaaaaagctggagaagcagaccattgtgggggtcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagtaacccaaatcagatgcagggaaaaagctggagaagcagaccattgtgggggtcac 320
Query: 121 aggtttaagaagaaagtttcagagttcactacagttgcaacagcaaagtggaagaaccag 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggtttaagaagaaagcttcagagttcactacagttgcaacagcaaagtggaagaaccag 380
Query: 181 gagggttcagataaagcaactggcagatgagtggatggcaggtctgggttggtaaacagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagggttcagataaagcaactggcagatgagtggatggcaggtctgggttggtaaacagg 440
Query: 241 ttatctcggttgatggcagttgagtagtcttgagttctctgcctattcgtcctttatcta 300
| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 ggaac-cggttgatggcagttgagtagtctggagttctctgcctattcgtcctttatcta 499
Query: 301 ctgttttatttttgagatagagtctctatacatagctctggagtcctggaactctctctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgttttatttttgagatagagtctctatacatagctctggagtcctggaactctctctg 559
Query: 361 taaactatgctgccctcaacttcgcagagtttctcctgcttctgtttcccaagt 414
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 560 taaactatgctgccctcaacctcgcagagtttctcctgcttctgtttcccaagt 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 813
Length adjustment: 9
Effective length of query: 405
Effective length of database: 804
Effective search space: 325620
Effective search space used: 325620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
