TCATAATTTGCGGGCGCTATACGAGTCACTATATTTCGAAAATGGGCGGG
AATCTTTGTTTTGACATGAACCCCATTTTTAAAGGGGGTATTTGAATTTT
TGGAGTCTAGCTTCTTATGCTCTTTGTTTATATAATATAAATATATATAA
ATACAAATACTAATATATTGGATATTAGTCCCCTATCAGATTTAGGGTTG
GGAAAAATGTTTTCCCACTCTGTTGATGGGCTTTTTGTCTTATTGAGAGA
GACTCTAATTTATAGAGGAGTAAGTGGGGAAAAGCCTCCAAGATATGGGC
ACAGGGGAAAAATTTCTTTATTATTTAGCAATGGCTTGGGCTGTAAAATC
AAGAATTGACTAATGGGACCTCATAAAATTGCAAAGCTTCTGTAAGGCAC
ATTGTTTTTGACAAATCAGTTTCCTTTAGACTACACCTTCAAGTCACTTA
AGATTGCATTTACAACAAAAATTTATCATCTAAATATCAACAGTAATGGC
AGCATTTATCTTGATAATCTCAGATCACAGTGTCTCCTGCTTTAACTATT
TCTAATGTTCCTTTATCCATTTGTTCACTGCTATGTGATCCAAACCCTGA
TGATCTCCTAGTGCCAGAGACTTCTCAGATCTAAAACAGATAGTGATAAA
TACTTCTGAATATCTTGGGGAAAGCACTCCCAAGTATTCCATGTGATGGT
ACCTTAAAGCCAGAATAAATTTGCTTTTTTATAGCTGGAAAAAACTTTCA
A

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXAGAAACCTGAAGAGAGCAGAGTGAGAAATTGTTCAGGA
GAATGCAGGTTCTCTCAGAGGGAAACAAAGTGCTATGAATATGTGAGTGC
AGCTTTGCACAGAGGCCATTGTGCCTGTGAGTTCATGTTCCTGCTGAGGA
CAGATTGCAATGGAGACAAAAGTGTAGGTGCCTGCTGATGTCTCGAGTTG
AGGATTAACCTGTTAGTGCAGGTGACTGCAGGGGCCAGGGAAGGGACCTG
GGCAAATAAGTGCATGAGCCTTCAGAAGACTAGGTTATGTGGGGACAGTG
GGCTATACACAGACAAACTGGTCTCCAGTTGAGTTGAGGTCTGAACTCTA
GTAGAACCTGATGGGTGGCAATTCCCACCTACATGGGACAGAAGGTGTTC
CCTCATGTCTTCTGGCCCCCTGGCTCCTGTTGAATTTACCCCACATACCC
CACAAGAGAGGATAGTGGCTAGCAGTCATGTACACAATGTCCCAAGCTTC
TGACCTTCAGGCTAGACTTCTCCCAGTTACCTAGCAACAACAAGATAACA
AGTCCACTATAAGAGGGGCTGCTTGGCCCACTCCTCACTCTTTTAAGCTT
TTACTTTCTTTAGTCTCTCTCTAAGCCCTCTCTCTCTAAGCCTTCACTTT
TCTTACTCTCTAACTCTCTTTCTCTCTTTCTTTTCCCCCTTCTCTCCTGT
TGGCCATGGCC

Query= MSMg01no420_k20.g1 MSMg01no420_k20.g1 CHROMAT_FILE:
MSMg01no420_k20.g1 PHD_FILE: MSMg01no420_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:36 2005
         (602 letters)



>mm_chrX_4767975_4768976
          Length = 1002

 Score = 1035 bits (535), Expect = 0.0
 Identities = 586/605 (96%), Gaps = 6/605 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaacctgaagagagcagagtgagaaattgttcaggagaatgcaggttctctcagaggg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaacctgaagagagcagagtgagaaattgttcaggagaatgcaggttctctcagaggg 260

                                                                       
Query: 61  aaacaaagtgctatgaatatgtgagtgcagctttgcacagaggccattgtgcctgtgagt 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacaaagtgctatgaatatgtgtgtgcagctttgcacagaggccattgtgcctgtgagt 320

                                                                       
Query: 121 tcatgttcctgctgaggacagattgcaatggagacaa-aagtgtaggtgcctgctgatgt 179
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 321 tcatgttcctgctgaggacagattgcaatggaga-aagaagtgtaggtgcctgctgatgt 379

                                                                       
Query: 180 ctcgagttgaggattaacctgttagtgcaggtgactgcaggggccagggaagggacctgg 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctcgagttgaggattaacctgttagtgcaggtgactgcaggggccagggaagggacctgg 439

                                                                       
Query: 240 gcaaataagtgcatgagccttcagaagactaggttatgtggggacagtgggctatacaca 299
           ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||
Sbjct: 440 gcaaataagtgcaggagccttcagaagacttggttatgtggggacattgggctaaacaca 499

                                                                       
Query: 300 gacaaactggtctccagttgagttgaggtctgaactctagtagaacctgatgggtggcaa 359
           ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 500 gacaagctggtctccagttgagttgaggtctgaactctagtagaacttgatgggtggcaa 559

                                                                       
Query: 360 ttcccacctacatgggacagaaggtgttccctcatgtcttctggccccctggctcctgtt 419
           |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 560 ttcccacctacatgggacagaaggcgttcccttatgtcttctggccccctggctcctgtt 619

                                                                       
Query: 420 gaatttacc----ccacataccccacaagagaggatagtggctagcagtcatgtacacaa 475
           ||| |||||    |||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gaagttaccacccccacattccccacaagagaggatagtggctagcagtcatgtacacaa 679

                                                                       
Query: 476 tgtcccaagcttctgaccttcaggctagacttctcccagttacctagcaacaacaagata 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtcccaagcttctgaccttcaggctagacttctcccagttacctagcaacaacaagata 739

                                                                       
Query: 536 acaagtccactataagaggggctgcttggcccactcctcactcttttaagcttttacttt 595
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 740 acaagtccactataagaggggctgcttggcccactcctcactctcttaagcttttacttc 799

                
Query: 596 cttta 600
           |||||
Sbjct: 800 cttta 804


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)