Query= MSMg01no421_c20.b1 MSMg01no421_c20.b1 CHROMAT_FILE:
MSMg01no421_c20.b1 PHD_FILE: MSMg01no421_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:15 2005
(525 letters)
>mm_chrX_96327153_96328075
Length = 923
Score = 946 bits (489), Expect = 0.0
Identities = 516/525 (98%), Gaps = 2/525 (0%)
Strand = Plus / Minus
Query: 1 caactggtgaacccagtgatgctggccaccctctgatctctcaacaataatctctgtgcc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 723 caactggtgaacccagtgatgctggccaccctctgatctctcaacaattatctctgtgcc 664
Query: 61 ccctttctgcccctcctatagttgtacataccactccctccaggcaaagaagaaccccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ccctttctgcccctcctatagttgtacataccactccctccaggcaaagaagaaccccct 604
Query: 121 tcgttagcccagtgcaccctggaagccagaaccagtaggcgactgctttcatgtggtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tcgttagcccagtgcaccctggaagccagaaccagtaggcgactgctttcatgtggtgct 544
Query: 181 gcaacacctttgtttagtgcttgcgacatccctgacattatgcactgccctgcttcaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gcaacacctttgtttagtgcttgcgacatccctgacattatgcactgccctgcttcaaac 484
Query: 241 ataaaaagccttattgctttgagttcactgcagtggcaccctgtcctctgctctgccatc 300
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ataaaaagcccga-ggctttgagttcactgcagtggcaccctgtcctctgctctgccatc 425
Query: 301 tttagtcggaatggtctctaagaagcttagcctcacccatgagcacttcccaagcctcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tttagtcggaatggtctctaagaagcttagcctcacccatgagcacttcccaagcctcct 365
Query: 361 aaaggagggcagctgatttccaggttgggcccaagctaacttcccgcctccagtgaatgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aaaggagggcagctgatttccaggttgggcccaagctaacttcccgcctccagtgaatgc 305
Query: 421 cttggctttccccaaaatgactgtctctaggtctggctcagggagaggacaggatggaga 480
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 304 cttggctttccccaaaatgactgtctctaggtctggctcagggagaggataggatggaga 245
Query: 481 gagcttactctactcttcctcccccgaccccctacatctgttcca 525
|||||||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 244 gagcttaccctactctccctcccccga-cccctacatctgttcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 923
Length adjustment: 10
Effective length of query: 515
Effective length of database: 913
Effective search space: 470195
Effective search space used: 470195
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_c20.g1 MSMg01no421_c20.g1 CHROMAT_FILE:
MSMg01no421_c20.g1 PHD_FILE: MSMg01no421_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:15 2005
(513 letters)
>mm_chrX_96166644_96167556
Length = 913
Score = 946 bits (489), Expect = 0.0
Identities = 507/513 (98%)
Strand = Plus / Plus
Query: 1 tgggattgcatatatgtatcaccacactctgtccacagtgttttttacacacaatataat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 tgggattgcatatatgtatcaccacactctgtccccagtgttttttacacacaatataat 260
Query: 61 gtcatctgcaaatagttatatgttcacattcttttctaatatggatttctttcacttctt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcatctgcaaatagttatatgttcacattcttttctaatatggatttctttcacttctt 320
Query: 121 tttcctatagaaatgatgaaaacatattttgtctttagtcttgtcttaggaaaaattttt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tttcttatagaaatgatgaaaacatattttgtctttagtcttgtcttaggaaaaaaattt 380
Query: 181 ctgtcagataattcattgaaagcttctaacagattggataagctctcttctattcttagt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtcagataattcatcgaaagcttctaacagattggataagctctcttctattcttagt 440
Query: 241 ttggtggacttgtgaaaaagtaatgaacaggattttataattggagacaattaggtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttggtggacttgtgaaaaagtaatgaacaggattttataattggagacaattaggtgttt 500
Query: 301 tctgttctatcatatctattacatcagtggcttttttttttgtattttgaatcaaccttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgttctatcatatctattacatcagtggcttttttttttgtattttgaatcaaccttg 560
Query: 361 catcctgggatagcacactgtcttgtgactaataagtctttttatgttattggcccagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcctgggatagcacactgtcttgtgactaataagtctttttatgttattggcccagta 620
Query: 421 ttttagtattgattgaagatttttatgtctgtattcttaagatacatcggtgttagatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttagtattgattgaagatttttatgtctgtattcttaagatacatcggtgttagatga 680
Query: 481 tttttactgtgatattattgtctgggttttgca 513
|||||||||||||||||||||||||||||||||
Sbjct: 681 tttttactgtgatattattgtctgggttttgca 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
