Query= MSMg01no421_g15.b1 MSMg01no421_g15.b1 CHROMAT_FILE:
MSMg01no421_g15.b1 PHD_FILE: MSMg01no421_g15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:35 2005
(175 letters)
>mm_chrX_70942883_70943457
Length = 575
Score = 279 bits (144), Expect = 9e-80
Identities = 153/156 (98%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 1 tctgcctcccaagtgct-gggactaaaggcgtgcgccaccactgcccagctttaacaatc 59
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 405 tctgcctcccaagtgctaggg-ctaaaggcgtgcgccaccactgcccagctttaataatc 347
Query: 60 ctttatattatgtggccctttataaatagaggacactcaggagtgactgccatacccaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ctttatattatgtggccctttataaatagaggacactcaggagtgactgccatacccaga 287
Query: 120 gcccatgtatgacttagttcagataccatattcctt 155
||||||||||||||||||||||||||||||||||||
Sbjct: 286 gcccatgtatgacttagttcagataccatattcctt 251
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 575
Length adjustment: 8
Effective length of query: 167
Effective length of database: 567
Effective search space: 94689
Effective search space used: 94689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no421_g15.g1 MSMg01no421_g15.g1 CHROMAT_FILE:
MSMg01no421_g15.g1 PHD_FILE: MSMg01no421_g15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:35 2005
(457 letters)
>mm_chrX_70757735_70758591
Length = 857
Score = 843 bits (436), Expect = 0.0
Identities = 451/456 (98%)
Strand = Plus / Plus
Query: 1 tcctcctacccctgacttctgactgttggcccaaagactttaacctgcttacagaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctcctacccctgacttctgactgttggcccaaagactttaacctgcttacagaaacaa 260
Query: 61 agcccgtacacatgggacctgtttccccaggaggacacactaatgccctgtcgtcttctt 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcccctacacatgggacctgtttccccaggaggacacactaatgccctgtcgtcttctt 320
Query: 121 atctagtcccagcttgtcctagctaaaaggactcagactagcctgtagccccaatggtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 atctagtcccagcttgtcctagctaaaaggactcagactagcctgtagccccaatggact 380
Query: 181 ccagctgtctataatttccttaattacctgtttaggttttggctatttccggttgctggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagctgtctataatttccttaattacctgtttaggttttggctatttccggttgctggg 440
Query: 241 ctgactctgtttttggactggtacctcagtagccagcagagctaggagacttaggtgtcc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgactctgagattggactggtacctcagtagccagcagagctaggagacttaggtgtcc 500
Query: 301 ttccttccagcagggagttttctggctctaaagagctggaggactagaacctgctgcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccttccagcagggagttttctggctctaaagagctggaggactagaacctgctgcctc 560
Query: 361 ctgtgcaggaggtttcacagaggctagctatggtggctttgtgtctccttgcctctctag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgcaggaggtttcacagaggctagctatggtggctttgtgtctccttgcctctctag 620
Query: 421 aaactacagggtgtcccagctgtctgtgctttaggg 456
||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaactacagggtgtcccagctgtctgtgctttaggg 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
