Query= MSMg01no422_e09.b1 MSMg01no422_e09.b1 CHROMAT_FILE:
MSMg01no422_e09.b1 PHD_FILE: MSMg01no422_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:41 2005
(245 letters)
>mm_chrX_87441623_87442267
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 atgactgagcctccctgttatcttgggtgctaattcaaaaggcttgactttccccattgt 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgactgagcctccctgctatcttgggtgctaattcaaaaggcttgactttccccattgt 386
Query: 61 gtgattcatctttcttctctgagtaccttccaagatttaaagcctccttgtacttgtatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgattcatctttcttctctgagtaccttccaagatttaaagcctccttgtacttgtatt 326
Query: 121 ttctgtgataaaatggaccttgagcatccttcgcagttcatttttaaattattttatcaa 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttctgtgaaaaaatggaccttgagcatccttcgcagttcatttttaaattattttatcaa 266
Query: 181 caagactgagaactcataagacagaatctgggttcttgagtaagtatcatgggtcttagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caagactgagaactcataagacagaatctgggttcttgagtaagtatcatgggtcttagc 206
Query: 241 tccta 245
|||||
Sbjct: 205 tccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_e09.g1 MSMg01no422_e09.g1 CHROMAT_FILE:
MSMg01no422_e09.g1 PHD_FILE: MSMg01no422_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:41 2005
(396 letters)
>mm_chrX_87301545_87302340
Length = 796
Score = 729 bits (377), Expect = 0.0
Identities = 392/397 (98%), Gaps = 2/397 (0%)
Strand = Plus / Plus
Query: 1 actaggtagaatatttttttatttagttaacagggctgggcctggtagtctttaaagatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaggtagaatatttttttatttagttaacagggctgggcctggtagtctttaaagatg 260
Query: 61 gatttaaatggattccaagtctccctaattaagcttggatcctgggattactgagcttac 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatttaaatggatttcaagtctccctaattaagcttggatcctgggattactgagcttac 320
Query: 121 ctagtgctagaagtgttacggaagtgtttttatgcctggtgcctagtatcattggtgttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagtgctagaagtgttacggaagtgtttttatgcctggtgcctagtatcattggtgttc 380
Query: 181 atatatgtttggaattgcgggcactaggctgtagccttaggctgtagagacttacctata 240
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 atatatgtttggaattgctggcactagactgtagccttaggctgtagagacttacctata 440
Query: 241 acatact-tgtgttgttatttatcaaggggctaggtatacaggtgttgatcctgacactt 299
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acata-tatgtgttgttatttatcaaggggctaggtatacaggtgttgatcctgacactt 499
Query: 300 ccatgggctctaagtcctaggcaaccagcttgggaccaggtacagagggctgcttctgga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ccatgggctctaagtcctaggcaaccagcttgggaccaggtacagagggctgcttctgga 559
Query: 360 atggggttcatggaagatattacagctctatagtcta 396
|||||||||||||||||||||||||||||||||||||
Sbjct: 560 atggggttcatggaagatattacagctctatagtcta 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
