Query= MSMg01no429_f02.b1 MSMg01no429_f02.b1 CHROMAT_FILE:
MSMg01no429_f02.b1 PHD_FILE: MSMg01no429_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:46 2005
(574 letters)
>mm_chrX_80661554_80662527
Length = 974
Score = 1079 bits (558), Expect = 0.0
Identities = 567/570 (99%)
Strand = Plus / Minus
Query: 5 gaattcttggatgtagttattattattccctcagtatcttagttgtataaagtatagtaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 gaattcttggatgtagttattattattccctcagtatcttagttgtataaagtatagtaa 715
Query: 65 gtagtatgttaggatatgtagtacggagtattctaggagtgaactagtattgttcacagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 gtagtatgttaggatatgtagtacggagtattctaggagtgaactagtattgttcacagc 655
Query: 125 tcagtctcatctatgaataaggcctggaaggaggttcattttgtgtcagaatacatttct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 tcagtctcatctatgaataaggcctggaaggaggttcattttgtgtcagaatacatttct 595
Query: 185 ttttaaacttaatctgaactaagcacaaattaagttatgttccagtgtgctctccaccgt 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 594 ttttaaacttaatctgaactaagcacaaattaagttatgttccagtgtgctctccacctt 535
Query: 245 agtctatctttaaaagaaagcttggatgaagctcatttctttgtctcaaaaggcctgctc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 agtctatctttaaaagaaagcttggatgaagctcatttctttgtctcaaaaggcctgctc 475
Query: 305 ttggaccttttctctgtaacaaggagaataggagtgaattattgtgcttgccacagaagt 364
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttggaccttttctccgtaacaaggagaataggagtgaattattgtgcttgccacagaagt 415
Query: 365 ttttccagagaaggcatgatgggagctagtatctatatctcagaatccatgtttcctaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ttttccagagaaggcatgatgggagctagtatctatatctcagaatccatgtttcctaaa 355
Query: 425 ttgatttttctcatgaaagagaataggagtggactactgtttctcaatcagtgtacccta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ttgatttttctcatgaaagagaataggagtggactactgtttctcaatcagtgtacccta 295
Query: 485 aggaagaagcttggtgtgagttttatctgtatggcagtgtctagtttttccaaatggatt 544
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 294 aggaagaagcttggtgtgagttttatctgtatgacagtgtctagtttttccaaatggatt 235
Query: 545 ggaataggagttattcagtgtattttcacc 574
||||||||||||||||||||||||||||||
Sbjct: 234 ggaataggagttattcagtgtattttcacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space: 543696
Effective search space used: 543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_f02.g1 MSMg01no429_f02.g1 CHROMAT_FILE:
MSMg01no429_f02.g1 PHD_FILE: MSMg01no429_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:46 2005
(537 letters)
>mm_chrX_80486414_80487350
Length = 937
Score = 986 bits (510), Expect = 0.0
Identities = 531/538 (98%), Gaps = 2/538 (0%)
Strand = Plus / Plus
Query: 1 ctgatctttcc-agaacttttatcatgaatgggtgttggattttgatttgctttttgtga 59
||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 ctgatctttccaag-acttttatcataaatgggtgttggattttgatttgctttttgtga 259
Query: 60 atttactggagttacacaatgaaagtgtttgcaaagtatctgatgcatgtaataaataca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atttactggagttacacaatgaaagtgtttgcaaagtatctgatgcatgtaataaataca 319
Query: 120 aaacaagttcctttcaatcctggtcatggtactaatggaatttactttgcagtggactaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaacaagttcctttcaatcctggtcatggtactaatggaatttactttgcagtggactaa 379
Query: 180 gacctgaaaggtaatacataggtaacaaataaacaagcaaacaaaccacaaatcttatat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gacctgaaaggtaatacataggtaacaaataaacaagcaaacaaaccacaaatcttatat 439
Query: 240 tgtgccaacaagctttgattgaaaagaaataaaacaatatctttctttataattttagct 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtgccaacaagctttgattgaaaagaaataaaacaatatctttctttataattttagcc 499
Query: 300 aactgaatattcaacatacctcacattaatgtcatgttagtgaaataatttcatgaactt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aactgaatattcaacatacctcacattaatgtcatgttagtgaaataatttcatgaactt 559
Query: 360 ttgtaccatgtatagagtacagtaaagttaattatgattaatgggtttaaattgattaaa 419
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgtaccatatatagagtacagtaaagttaattatgattaatgggtttaaattgattaaa 619
Query: 420 gttttgactggtatatatattttcaatctttcctggatgttggacctataaaatcatgca 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attttgactggtatatatattttcaatctttcctggatgttggacctataaaatcatgca 679
Query: 480 tgttatttatatttttttatactgtttacagcatgacacctgactgaatttggagtag 537
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 680 tgttatttatatttttttatactgttgacagcatgacacctgactgaatttggagtag 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
