XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTA
CCTATATACCTCCATATAAAAGGAAAACTTAATTTAGTTCCAGATTCCTT
ATGTGATATACACTTATTTTCAATATAGATTAAAATTACTTCATAATCCT
TACCCATCTTTACCAAGAAGATTAGAACATTTTTCTAGAAAACATTCTAT
CACAATGTGTTGGAGAGGACCTCTCTGACTGATCACCCTGAACTCCTCAG
ACATCTGGTCGACCTTAATTTCCCATTGCTACTTTTGAACTGATATTATG
AAAAGGTAGACAAATATACAGAAAAAATTATACTCTTATGGACATCTTAT
CCACTCCATTTCTGCCGAAAATATTTTTCTACAACAACATATCATCAAAT
CCTAAACATTTATTTACTCTGATCTTTGTATCCTTCCATGGTTTCGATTT
TTTCCAATAGACATGATCCAAACCAGCAATTCTAGACCTTTTCATACAAT
CCTAATAGTAGAGCCAACCAATTGATAGTACATAACATTTTGTTTTTCAT
TTCAAGAATAATGCTTGCCCCTTGCAGACAAAACTTGCAATTATAACAAT
GCCCTGTATGTTGTTGCTTCTCTTGGAAATTCATTTTCTATTTTTAGAAT
TGGCAGGTCTCTTACAATTACAGTACAAGTCTTCTCACATACCTCACAAA
AAAGAAATGATCCCAGTTTTATAAGAA

NGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTAAACCTGATAAACAGTTTCAGCA
CAGTAGCTGGATATAAAATTAACTCCAACAAATCAGTGGTCTTTCTCTAC
AAAAAGGATAAACAGGATAAGAAAGAAATTAGGGAAAAAACACCCTTCTC
AATAGTCACAAATAATATAAAATACCTTGTTATGACTCTAACTAAGGAAG
TAAAATATCTGTATGACAAGAACTTCAAGTCTCTGAAGAAAGAAGTTGAA
GAAGATCTCAGAAGATGGAAAGATCTCCCATGTTCATGGATGGGCAGGAT
TAATATAGTAAAAATGGCTATCCTGCTGAAAGCAATCTAGAGATTCAATG
CAATCCCCATCAAAATTCCAACTCAATTCTTCACTGAGTTAGAAAGGGCA
ATTTGCAAATTCATCTGGAATAATAACAAACCTAGGATAGCAAAACTATT
CTCAAGAATAAACGAGCCTCTGTTGGAATCACCATGCTTGACATTAAGCT
GTACTACAGAGCAATTGTGATAAAAAGTGCATGGTACTGGCATAGCTAGA
GACCAGCAGAGCAGTGTGATAGAAATGAAGACCCAGAAATGAACCCCCCA
CTCTATGGGCTCTTGATCTTTGACAAGAAAACTAAACCCTCTACCGCCCA
AAAAAACGCCCTTTTAAAAAAAGGGGCCGGCGCCCCCT

Query= MSMg01no429_k14.b1 MSMg01no429_k14.b1 CHROMAT_FILE:
MSMg01no429_k14.b1 PHD_FILE: MSMg01no429_k14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:13 2005
         (564 letters)



>mm_chrX_152614972_152615936
          Length = 965

 Score = 1046 bits (541), Expect = 0.0
 Identities = 556/561 (99%), Gaps = 1/561 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctacctatatacctccatataaaaggaaaacttaatttagttccagattccttat 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gaattctacctacatacctccatataaaaggaaaacttaatttagttccagattccttat 706

                                                                       
Query: 65  gtgatatacacttattttcaatatagattaaaattacttcataatccttacccatcttta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gtgatatacacttattttcaatatagattaaaattacttcataatccttacccatcttta 646

                                                                       
Query: 125 ccaagaagattagaacatttttctagaaaacattctatcacaatgtgttggagaggacct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ccaagaagattagaacatttttctagaaaacattctatcacaatgtgttggagaggacct 586

                                                                       
Query: 185 ctctgactgatcaccctgaactcctcagacatctggtcgaccttaatttcccattgctac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ctctgactgatcaccctgaactcctcagacatctggtcgaccttaatttcccattgctac 526

                                                                       
Query: 245 ttttgaactgatattatgaaaaggtagacaaatatacagaaaaaattatactcttatgga 304
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 525 ttttgaactgatattatgaaaaggtagacaaatatacagagaaaattatactcttatgga 466

                                                                       
Query: 305 catcttatccactccatttctgccgaaaatatttttctacaacaacatatcatcaaatcc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 catcttatccactccatttctgccgaaaatatttttctacaacaacatatcatcaaatcc 406

                                                                       
Query: 365 taaacatttatttactctgatctttgtatccttccatggtttcgattttttccaatagac 424
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgaacatttatttactctgatctttgtatccttccatggtttcgattttttccaatagac 346

                                                                       
Query: 425 atgatccaaaccagcaattctagaccttttcatacaatcctaatagtagagccaaccaat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atgatccaaaccagcaattctagaccttttcatacaatcctaatagtagagccaaccaat 286

                                                                       
Query: 485 tgatagtacataacatttt-gtttttcatttcaagaataatgcttgccccttgcagacaa 543
           |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tgatagtacataacttttttgtttttcatttcaagaataatgcttgccccttgcagacaa 226

                                
Query: 544 aacttgcaattataacaatgc 564
           |||||||||||||||||||||
Sbjct: 225 aacttgcaattataacaatgc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 965
Length adjustment: 10
Effective length of query: 554
Effective length of database: 955
Effective search space:   529070
Effective search space used:   529070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)