CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCATTTATTGCCTGCTCTTAGAACCACCCAAAAATTAAGGACAAAGT
GGCTTATCCATTGGTGATGTGGCATAGAAACTAGGAGAGATGTGTTACAG
CACAGCTCCAGATGACATGCAGCCCTATAGAAGAAGGATGCCAGGGTTAA
GGAGAAAGACAAAAGGACATTGCTGCCTACAGAGCTAAGGGAAAACCCAC
TGAAGTGAAAAAGGGGGTAATCAAGGCTGAAAAGAGCAAAGAAAAGATGG
AAAAAGTAGACAGGAAAGAGGATGAGGAGGATGAGGAAGAAGCAGAAGAT
AATAATGAAGAAGATCATCATAAATAAATTGGTGTTAGCACAATACTTTT
TGTTGTCTATAAAGCATTTAACATCCCTGTACACAACTCACACATTTTAA
AAGGAAAGAATTGAAATGTAAGGCTTTGTATTTTTCCTTGAACTGTACAG
GGGTGGGTTTTTGTTTTGTNNNNTTCTTNNTNTTTTCTNNTCCTTCTNTT
CTTCCTTCTCCCTCTCTCTCTTTCTTTTCTATTCCCTNTTTTTCACTTTA
TATCTTTNCCCCCCCCCTCCTTTCCTTCCTTTNTCTTCTTCCTCTTTCTT
CTTCCCTTCCCACCGCCNCCCTTTTTCCCCTCTTTTCTTCCTTCCGTCCC
CCGCCACACATCTTTGTATTTTCCTTCTTTCTATTTTCGCTCCCCCCCTC
CTTTTCTGTACTCTCCTCCATTATCTCCTCCGTCCTTCCTTC

GATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACATATCCATGCTCCCAAAATGAGA
GTACTTTGGCTAAAATCAAATGCCAATATCCTTTAAGTAAAGACTTATAA
GAAGTTACCTTGAAAATGTATCTGCTTCAGAGATGAATACATTAAACAGT
ATATAGAAGATGCACTAAGTTTAAGAAAATTCATTATGACTAGCAATTCA
CAAGCCAAATACATTCCAGCAAAGTGGATCAAATGAATCAGCACTACTCA
TTTGATATTGCAAAGAGAAATTATTATAATGTCAATAAATACTGGAGACA
TTTGGTCATGTTTCTTAGCAGCTGGGCATATGCTCTTGTGCACCTTACCT
AAATTTCCTCATTATATACTTAGTTTTAGAGCATTATAAATCTCTATAGA
GATGCATTTGTGAAATGTGTTACATTCCTGGAGCTCGTGTANAATGACAC
TGACTCAATTTGTATAAACATTTGTTTTTATACTGCCAGATTTCGAANAA
AATAAACAAGACNATGATTCTGGAAGAACATGTTTANAGGAAAATTAACT
ACTACTATGGGTCTCCGGACCGGTTTATAATAAGCCAAAAAAATGGCCCT
GAGTTTTTTAATGGCCCTGGGAACTAATCTAAAAACCCCTTTATTATTTT
TCTCGAAAAAAAAAGGGGAAACTACTTTTTTTTATTAACAAAATCCTTTG
TTTTTCTTTATAAAACATATAAG

Query= MSMg01no435_e08.b1 MSMg01no435_e08.b1 CHROMAT_FILE:
MSMg01no435_e08.b1 PHD_FILE: MSMg01no435_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:56 2005
         (459 letters)



>mm_chrX_119333353_119334211
          Length = 859

 Score =  803 bits (415), Expect = 0.0
 Identities = 430/435 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccatttattgcctgctcttagaaccacccaaaaattaaggacaaagtggcttatc 64
           ||||||||||||  | ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 435 gaattccatttagggtctgctcttagaaccacccaaaaattaaagacaaagtggcttatc 376

                                                                       
Query: 65  cattggtgatgtggcatagaaactaggagagatgtgttacagcacagctccagatgacat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cattggtgatgtggcatagaaactaggagagatgtgttacagcacagctccagatgacat 316

                                                                       
Query: 125 gcagccctatagaagaaggatgccagggttaaggagaaagacaaaaggacattgctgcct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gcagccctatagaagaaggatgccagggttaaggagaaagacaaaaggacattgctgcct 256

                                                                       
Query: 185 acagagctaagggaaaacccactgaagtgaaaaagggggtaatcaaggctgaaaagagca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acagagctaagggaaaacccactgaagtgaaaaagggggtaatcaaggctgaaaagagca 196

                                                                       
Query: 245 aagaaaagatggaaaaagtagacaggaaagaggatgaggaggatgaggaagaagcagaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aagaaaagatggaaaaagtagacaggaaagaggatgaggaggatgaggaagaagcagaag 136

                                                                       
Query: 305 ataataatgaagaagatcatcataaataaattggtgttagcacaatactttttgttgtct 364
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 135 ataataatgaagaagatcatcataaataaattggtattagcacaatactttttgttgtct 76

                                                                       
Query: 365 ataaagcatttaacatccctgtacacaactcacacattttaaaaggaaagaattgaaatg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75  ataaagcatttaacatccctgtacacaactcacacattttaaaaggaaagaattgaaatg 16

                          
Query: 425 taaggctttgtattt 439
           |||||||||||||||
Sbjct: 15  taaggctttgtattt 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no435_e08.g1 MSMg01no435_e08.g1 CHROMAT_FILE:
MSMg01no435_e08.g1 PHD_FILE: MSMg01no435_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:56 2005
         (433 letters)



>mm_chrX_119156121_119156953
          Length = 833

 Score =  824 bits (426), Expect = 0.0
 Identities = 431/433 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acatatccatgctcccaaaatgagagtactttggctaaaatcaaatgccaatatccttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 acatatccatgctcccaaaatgagagtactttggctaaaatcaaatgtcaatatccttta 260

                                                                       
Query: 61  agtaaagacttataagaagttaccttgaaaatgtatctgcttcagagatgaatacattaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaaagacttataagaagttaccttgaaaatgtatctgcttcagagatgaatacattaa 320

                                                                       
Query: 121 acagtatatagaagatgcactaagtttaagaaaattcattatgactagcaattcacaagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtatatagaagatgcactaagtttaagaaaattcattatgactagcaattcacaagc 380

                                                                       
Query: 181 caaatacattccagcaaagtggatcaaatgaatcagcactactcatttgatattgcaaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaatacattccagcaaagtggatcaaatgaatcagcactactcatttgatattgcaaag 440

                                                                       
Query: 241 agaaattattataatgtcaataaatactggagacatttggtcatgtttcttagcagctgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaaattattataatgtcaataaatactggagacatttggtcatgtttcttagcagctgg 500

                                                                       
Query: 301 gcatatgctcttgtgcaccttacctaaatttcctcattatatacttagttttagagcatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatatgctcttgtgcaccttacctaaatttcctcattatatacttagttttagagcatt 560

                                                                       
Query: 361 ataaatctctatagagatgcatttgtgaaatgtgttacattcctggagctcgtgtanaat 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 ataaatctctatagagatgcatttgtgaaatgtgttacattcctggagctcgtgtagaat 620

                        
Query: 421 gacactgactcaa 433
           |||||||||||||
Sbjct: 621 gacactgactcaa 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space:   349376
Effective search space used:   349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)