Query= MSMg01no435_e17.b1 MSMg01no435_e17.b1 CHROMAT_FILE:
MSMg01no435_e17.b1 PHD_FILE: MSMg01no435_e17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:58 2005
(538 letters)
>mm_chrX_142905964_142906901
Length = 938
Score = 1002 bits (518), Expect = 0.0
Identities = 533/538 (99%)
Strand = Plus / Plus
Query: 1 tacatattttctaggtatgtacacgtatcaaaatatgttaaatgtagaagacaaaattgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatattttctaggtatgtacacgtatcaaaatatgttaaatgtagaagacaaaattgt 260
Query: 61 ggagatagctttgtgatagactggaaggcatgactcattaaatcagaggattttttttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagatagctttgtgatagactggaaggcatgactcattaaatcagaggattttttttta 320
Query: 121 atgaggggtaagcttttgaacgattatgtcaggcccagctcatatcagtatgttgctgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgaggggtaagcttttgaacgattatgtcaggcccagctcatatcagtatgttgctgac 380
Query: 181 caggtaaagctttggctttcagatggtcgggggcttcatgctttgtttcctttgaggaca 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 caggtaaagctttggctttcagatggtcggggacttcatgctttgtttcctttgaggaca 440
Query: 241 tatggctttctgaataaaatcttatatataatacatacttaataaaaaaactgatagaga 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tatggctttctgaataaaatcttatatataacacatacttaataaaaaaactgatagaga 500
Query: 301 agtaccagcacagctttgaggctagcatgtttcacataactaagcaaacaagcaaggctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtaccagcacagctttgaggctagcatgtttcacataactaagcaaacaagcaaggctt 560
Query: 361 caaaccaaaacaaaatctgaattgtacttttttcctctaatgttattaaatatgtttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaccaaaacaaaatctgaattgtacttttttcctctaatgttattaaatatgtttcat 620
Query: 421 atttcttatttttttataagatctgtgtaaaagacagcacagtaaatcatatgtgttgtg 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 atttcttatttttttataagatctgtgtaaaagacaacacagtaaatcatatgtgttgtg 680
Query: 481 gcagattattagaggagaaaaattagcaaagagacttcccaagttgaggcctgaactt 538
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 gcagattattagaggagagaaattagcaaagagacttcccaagttgaggactgaactt 738
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space: 489984
Effective search space used: 489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_e17.g1 MSMg01no435_e17.g1 CHROMAT_FILE:
MSMg01no435_e17.g1 PHD_FILE: MSMg01no435_e17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:58 2005
(367 letters)
>mm_chrX_143074025_143074792
Length = 768
Score = 663 bits (343), Expect = 0.0
Identities = 361/367 (98%), Gaps = 1/367 (0%)
Strand = Plus / Minus
Query: 1 cctttgggaagcagataagaaattgtatagagtagatgaaggcttttatatatagtatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctttgggaagcagataagaaattgtatagagtagatgaaggcttttatatatagtatcc 384
Query: 61 ttccttccaaattcattaccatgtcattaagaagaatcagatcttagatttcaacta-tt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 383 ttccttccaaattcattaccatgtcattaagaagaatcagatcttagatttcaactattt 324
Query: 120 ttttttcagaaatgcaatttaatttgcatttctgtttgctggtgtgcaatctggatttca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttttttcagaaatgcaatttaatttgcatttctgtttgctggtgtgcaatctggatttca 264
Query: 180 tttaaccatagaaaaggtaattatatgaggctttaaaaagtttgctttgggttttgagcc 239
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 263 tttaaccatagaaaaggtaattatatgaggctttaaaaagtttggtttgggttttgagcc 204
Query: 240 tagcttttaaaagctgagccattctttgatcatgctccagttcatgtacagataacacaa 299
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 203 tagcttttaaaagctgagccattgtttgatcatgctccagttcatgtacagataacacga 144
Query: 300 attgaacttttattttattttattttattttattttattttattttattttattttattt 359
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 143 attgaacttttattttattttattttatttcattttattttgttttattttattttattt 84
Query: 360 tatttta 366
|||||||
Sbjct: 83 tatttta 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 768
Length adjustment: 9
Effective length of query: 358
Effective length of database: 759
Effective search space: 271722
Effective search space used: 271722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
