Query= MSMg01no436_g10.b1 MSMg01no436_g10.b1 CHROMAT_FILE:
MSMg01no436_g10.b1 PHD_FILE: MSMg01no436_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:27 2005
(556 letters)
>mm_chrX_68607878_68608833
Length = 956
Score = 1062 bits (549), Expect = 0.0
Identities = 552/553 (99%)
Strand = Plus / Plus
Query: 4 ggaattctcctgtctctctcatcatagatgactaagagtggaggtgaaaattaggctatc 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcctgtccctctcatcatagatgactaagagtggaggtgaaaattaggctatc 263
Query: 64 agttgctctcaccagcatggctataatatctgtcctttcctccctcattagtgatcatga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agttgctctcaccagcatggctataatatctgtcctttcctccctcattagtgatcatga 323
Query: 124 ggagatagagaactatgggtttagtcaccctctttgacatgatcctaatgccccatgttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ggagatagagaactatgggtttagtcaccctctttgacatgatcctaatgccccatgttc 383
Query: 184 ttgattaattcttcttacattttgcctagttaactctaacctgtctgtactagaacctat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgattaattcttcttacattttgcctagttaactctaacctgtctgtactagaacctat 443
Query: 244 gaaaaatatctctgaagcaaatattgacacttgttatgtcaaggaagtcagctaactttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gaaaaatatctctgaagcaaatattgacacttgttatgtcaaggaagtcagctaactttt 503
Query: 304 attaattatatgaatcagcgagattcttgtatgtgtcaatccaccaatctccaactttta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attaattatatgaatcagcgagattcttgtatgtgtcaatccaccaatctccaactttta 563
Query: 364 cctttctttgaacttcttttctctcaaattcataatctggcaaatccatattatgtactt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctttctttgaacttcttttctctcaaattcataatctggcaaatccatattatgtactt 623
Query: 424 cagcctggaagaggacacaaagataacaaggcctaaggtgaaaccctcagttaaggctgc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cagcctggaagaggacacaaagataacaaggcctaaggtgaaaccctcagttaaggctgc 683
Query: 484 tggatcaagagagagagattataatttaccacacctaacttaatttaaacccctataatc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tggatcaagagagagagattataatttaccacacctaacttaatttaaacccctataatc 743
Query: 544 tagagaaatacaa 556
|||||||||||||
Sbjct: 744 tagagaaatacaa 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no436_g10.g1 MSMg01no436_g10.g1 CHROMAT_FILE:
MSMg01no436_g10.g1 PHD_FILE: MSMg01no436_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:28 2005
(396 letters)
>mm_chrX_68788500_68789295
Length = 796
Score = 739 bits (382), Expect = 0.0
Identities = 391/396 (98%), Gaps = 4/396 (1%)
Strand = Plus / Minus
Query: 1 tgttccaagacagctaaatgtgttataagatggcttttggaggtagcaacaaataattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgttccaagacagctaaatgtgttataagatggcttttggaggtagcaacaaataattgc 381
Query: 61 tggctgcaaccagtctgtaaagccttgacacactgaaaagctgaattcatccaaggtagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggctgcaaccagtctgtaaagccttgacacactgaaaagctgaattcatccaaggtagc 321
Query: 121 tgaagaagttgccctataggccctgtctcctttactccagatggcctaggaggaggggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgaagaagttgccctataggccctgtctcctttactccagatggcctaggaggaggggga 261
Query: 181 gacagagctctgagagcttctaatctgtagtcttcccaggaaccctgtcatgattgacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gacagagctctgagagcttctaatctgtagtcttcccaggaaccctgtcatgattgacca 201
Query: 241 tgtcatcttgaccgaactgggctcaactaagagatatgcttctaggtgaatttattagga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 tgtcaacttgaccgaactgggctcaactaagagatatgcttctaggtgaatttattagga 141
Query: 301 tgcttacagaaaggattgattgaggtgggaaggtcctccctccctcagtgtgtgcagcgc 360
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 140 tgcttacagaaaggattgattgaggtgggaaggt----cctccctcagtgtgtgcagcgc 85
Query: 361 cttccagaggtggcccagatattgagaggcctgagg 396
||||||||||||||||||||||||||||||||||||
Sbjct: 84 cttccagaggtggcccagatattgagaggcctgagg 49
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
