NGCTTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGTTTATGCTCTGAGTCCCATTTTTTAATGGGATTATTT
GATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAG
TCCCCTATCTGTTAGGATTGGTTAAGATCCTTTCCCAATTTGTTGGTGGC
CTTTTTGTCTCATAGACAGTGTCTTTTGCCTTATAAAAAATTTGCAATTT
TATGAGGTCACACTTGTTGATTCTTGATCTTACATCACCAGTCATTGCTG
TTCTATTCAGGAATATTTCCCCTGTGCCCATATCTTCGAGGCTTTCCCCC
ACTTTCTCCTTTATAAGTTTCAGTGTCTCTGATTTTATTTGGAGTTCCTT
GATCCACTTAGACTTGACCTTAGTACAAGGAGATGAGAATGGATCAATTC
TAATTCTTCTGCATGATAACATCCAGTTGTGCCAGCACCATATGTTGAAA
ATGCTGTCTTTTTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAA
GTGACCATAGGTGAGTGGGAAGATTTCTGAGTCTTCAATTCTATTCCATT
GGTCTACCTGTCTGTAGCTATACCAGTACCATGCAGTATTTATCACAATT
GCTCTTTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAAGATTTTC
ACAGCATTACTAACAACAGAATAGAAAGAGGAACTCCTCTCTCCACC

TTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTTTTGAATAGTCCACTTT
GATATTCAATCTTCTTCAGTTTAGCTATACTGTTAACAGGATTTAACAAC
TATGATTTTATAGTGTGTGTAAGTGATTTGTGAGTATTCATGCTTATTCA
TTCTGTCAATGTGGAAGGCACAGGCTCACATTCATTTAAATATTTTAATT
TGTATTCATTGAAGTCTCAATTTTCTTTATGGCAAAAATTTAACTGATAC
ATAGACATTTAGTGTTGCTAATAAGTGTTGTGAATGAGTGTTATTTTCTT
TTCATGTTCATTCTATTTTCTGTTTTATTTCTATACAGGCAAGCTTTCAA
TTTACATTGTGAACTTTATTTCAGAACTAATGAATTCATCATACGTGACC
TATACTAATTTTTGATTGATGTAGTTTGATTTTCTAAATACATATTTGTG
TCATATCACAAATGATTTTATTTGTATTTTCCTAAACATGCCTATACTTC
ATTTTCATTATTGGTAACCATAGTCAATATTCTATTAAAAGAGAGTGGTA
AGGGAAGAAAAGGCACTATATTATAATTAGCACATTATATTAGCCATGTA
TTGTACCAGAACTTCTAAATAAGATGCATAGCACACCTCACCCCAGAAAT
CAGAACCCTGAATTCTGAAGTAGTGTGAGTAGCTGGTACCTGGCCTGCA

Query= MSMg01no441_f01.g1 MSMg01no441_f01.g1 CHROMAT_FILE:
MSMg01no441_f01.g1 PHD_FILE: MSMg01no441_f01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:08:03 2005
         (596 letters)



>mm_chrX_36844612_36845607
          Length = 996

 Score = 1137 bits (588), Expect = 0.0
 Identities = 594/596 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttttgaatagtccactttgatattcaatcttcttcagtttagctatactgttaacagg 60
           |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 acttttgaatagtctactttgatattcaatcttcttcagtttagttatactgttaacagg 260

                                                                       
Query: 61  atttaacaactatgattttatagtgtgtgtaagtgatttgtgagtattcatgcttattca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttaacaactatgattttatagtgtgtgtaagtgatttgtgagtattcatgcttattca 320

                                                                       
Query: 121 ttctgtcaatgtggaaggcacaggctcacattcatttaaatattttaatttgtattcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgtcaatgtggaaggcacaggctcacattcatttaaatattttaatttgtattcatt 380

                                                                       
Query: 181 gaagtctcaattttctttatggcaaaaatttaactgatacatagacatttagtgttgcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagtctcaattttctttatggcaaaaatttaactgatacatagacatttagtgttgcta 440

                                                                       
Query: 241 ataagtgttgtgaatgagtgttattttcttttcatgttcattctattttctgttttattt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataagtgttgtgaatgagtgttattttcttttcatgttcattctattttctgttttattt 500

                                                                       
Query: 301 ctatacaggcaagctttcaatttacattgtgaactttatttcagaactaatgaattcatc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctatacaggcaagctttcaatttacattgtgaactttatttcagaactaatgaattcatc 560

                                                                       
Query: 361 atacgtgacctatactaatttttgattgatgtagtttgattttctaaatacatatttgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atacgtgacctatactaatttttgattgatgtagtttgattttctaaatacatatttgtg 620

                                                                       
Query: 421 tcatatcacaaatgattttatttgtattttcctaaacatgcctatacttcattttcatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatatcacaaatgattttatttgtattttcctaaacatgcctatacttcattttcatta 680

                                                                       
Query: 481 ttggtaaccatagtcaatattctattaaaagagagtggtaagggaagaaaaggcactata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttggtaaccatagtcaatattctattaaaagagagtggtaagggaagaaaaggcactata 740

                                                                   
Query: 541 ttataattagcacattatattagccatgtattgtaccagaacttctaaataagatg 596
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttataattagcacattatattagccatgtattgtaccagaacttctaaataagatg 796


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space:   577796
Effective search space used:   577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)