NTCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCCAACTCTACCACAAAAATAAAAGGAAGCAACAATTACTTTTCCT
TAATATCTCTTAATATCAATGGACTCAATTCCCCAATAAAAAGACATAAA
CTAACAGACTGGCTACACACAGGACCCAACATTCTGCTGCTTACAGGAAA
CCCACCTCAGGGAAAAAGACAGACACTACCTCAGAGTGAAAGGCTGGAAA
ACAATTTTCCAAGAAAACTGTCTGAAGAAACAAGCTGGAGTAGCCATTCT
AATATCGGATAAAATCGACTTCCAACCAAAAGTTATCAAAAAAGACAAGG
AGGGACACTTCATACTCATCAAAGGTAAAATCCTCCAAGAGGAACTCTCA
ATTCTGAATATCTACACTCCAAATGCAAGGGCAGCCACATTCATTAAAGA
CACTTTAGTAAAGCTCAAAGCACACATTGCAACTCACACAATAATAGTGG
GAGACTTCAACACACCACTTTCATCAATGGACAGATCGTGGAAACAGAAA
CTAAACAGGGACACAGTGAAAATAACAGAAGTTATGAAACAAATGGACCT
GACAGATATCTACAGAACATTTTATCCTAAAACAAAAGGATATACCTTCC
TCAGCACCTCACGGGACCTTCTCCAAAATTGACCATATAATTGGTCACAA
AAAAGGCTTCTTCAAATACTAAAAATTGAAATTTGCCCCCGGTTCCTATT
TGAACCCCGGGACAAAAGGGG

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGAAAAGCCTACTTTCTAACT
TAATGTCTCAATACATTTTCAAATTTTAGATTGTATTTCATCATGTTCAG
TTGATGGTCATTGCCAGATATAGGAACAGAGATGAAGGATGGCAGTCATT
TAGGTATCACTGATAGGGATCAAAGTAGATTTTTTAAAAAATCATAGTTC
AGGCATTATGAAATATGAGCTCGAGGATAGTCGAGAGACTATATCCTGTA
GCCTGCTGTATCAATCTTTTAATATTATGGACAGAGTTTTCTATCATCTC
CCTACACATGAGAAATTTGATTGCAGACACATTTTGTAATAAAATCAAAC
TTATTTTGGAGAAATAAATTTTGTTGAAATTTATTTCTCATAATATAGTT
ACTGTCTCTCACAAGATGTACATATATTGAATATGCAATCTATCTCAAGC
AATATCAGTAATTTCAAACTAGGAAAATCAAATTATAGAGTTAAAATGAA
AAGTATGGATGCTCTAAAACATCTTAAGCTGAATTTTCTATTTTTAAATA
CAGTATTACTAAAGTGATTCTGCATTTAAATCTTCCCTCCCTGACACTGA
ACCATTTCCACTTGAAACTTTGCAGACGATTTTAAAAAACAAACTCTCTT
ATAAATTTAGGCCTCTCTGGCCATCTCCTCCTTTCTCTACTTTGTCTTTT
TTCACATGTATCCTCACTGTCG

Query= MSMg01no442_b13.g1 MSMg01no442_b13.g1 CHROMAT_FILE:
MSMg01no442_b13.g1 PHD_FILE: MSMg01no442_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:07 2005
         (441 letters)



>mm_chrX_42309583_42310424
          Length = 842

 Score =  816 bits (422), Expect = 0.0
 Identities = 437/442 (98%), Gaps = 1/442 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctgaaaagcctactttctaacttaatgtctcaatacattttcaaattttagattgtatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaaaagcctactttctaacttaatgtctcaatacattttcaaattttagattgtatt 260

                                                                       
Query: 61  tcatcatgttcagttgatggtcattgccagatataggaacagagatgaaggatggcagtc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 261 tcatcatgttcagttgatggtcattgccagatataggaacagagatgaaggatggcagtt 320

                                                                       
Query: 121 atttaggtatcactgatagggatcaaagtagattttttaaaaaatcatagttcaggcatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttaggtatcactgatagggatcaaagtagattttttaaaaaatcatagttcaggcatt 380

                                                                       
Query: 181 atgaaatatgagctcgaggatagtcgagagactatatcctgtagcctgctgtatcaatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgaaatatgagctcgaggatagtcgagagactatatcctgtagcctgctgtatcaatct 440

                                                                       
Query: 241 tttaatattatgga-cagagttttctatcatctccctacacatgagaaatttgattgcag 299
           |||||||  | ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaataagaaggaacagagttttctatcatctccctacacatgagaaatttgattgcag 500

                                                                       
Query: 300 acacattttgtaataaaatcaaacttattttggagaaataaattttgttgaaatttattt 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acacattttgtaataaaatcaaacttattttggagaaataaattttgttgaaatttattt 560

                                                                       
Query: 360 ctcataatatagttactgtctctcacaagatgtacatatattgaatatgcaatctatctc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcataatatagttactgtctctcacaagatgtacatatattgaatatgcaatctatctc 620

                                 
Query: 420 aagcaatatcagtaatttcaaa 441
           ||||||||||||||||||||||
Sbjct: 621 aagcaatatcagtaatttcaaa 642


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space:   359856
Effective search space used:   359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)