Query= MSMg01no442_d19.b1 MSMg01no442_d19.b1 CHROMAT_FILE:
MSMg01no442_d19.b1 PHD_FILE: MSMg01no442_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:19 2005
(413 letters)
>mm_chrX_106556502_106557313
Length = 812
Score = 770 bits (398), Expect = 0.0
Identities = 407/410 (99%), Gaps = 1/410 (0%)
Strand = Plus / Plus
Query: 4 ggaattctatgatgctgccaacagtaatttaagcattcatctcttcttttacaatggtgc 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctatgatgctgcaaacagtaatttaagcattcatctcttcttttacaatggtgc 263
Query: 64 cttaaactgatgattaacaaagacaattaacttttattggactattattatgcaccatat 123
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttaaactgatgattaacaaa-acaattaacttttattggactattattatgcaccatat 322
Query: 124 actgcactatcattttataaggtttattttagcaataattcattatacctctgtgcagtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actgcactatcattttataaggtttattttagcaataattcattatacctctgtgcagtt 382
Query: 184 actaccatcattattccattaaaagtggagaaggaatagattttataaagttacataact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 383 actaccatcattattccattaaaagtggagaaggaatagattttataaagttacatacct 442
Query: 244 ttctcactgttatacagtcagtaattcagaatttatatctgctgggcttaatccaaagaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ttctcactgttatacagtcagtaattcagaatttatatctgctgggcttaatccaaagaa 502
Query: 304 attgtatcataacttgaaaattcattatcaatggagctgttctccaaagtcaaactactt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 attgtatcataacttgaaaattcattatcaatggagctgttctccaaagtcaaactactt 562
Query: 364 ccctaggtgtctcataaatgttagggaggacattttctattctccatagg 413
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ccctaggtgtctcataaatgttagggaggacattttctattctccatagg 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 812
Length adjustment: 9
Effective length of query: 404
Effective length of database: 803
Effective search space: 324412
Effective search space used: 324412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_d19.g1 MSMg01no442_d19.g1 CHROMAT_FILE:
MSMg01no442_d19.g1 PHD_FILE: MSMg01no442_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:19 2005
(393 letters)
>mm_chrX_106723050_106723842
Length = 793
Score = 737 bits (381), Expect = 0.0
Identities = 390/393 (99%)
Strand = Plus / Minus
Query: 1 actgagaatctgagagaagccagattaattcagtcagcttgaagagatgcttaagccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 actgagaatctgagagaagccagattaattcagtcagcttgaagagatgcttaagccaga 711
Query: 61 acagtgcacttgaaccagccagccagagttcagaaaaagaaatggaaaagatgatcttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 acagtgcacttgaaccagccagccagagttcagaaaaagaaatggaaaagatgatcttat 651
Query: 121 tcagtagtgaggctctgagaaaacaattacatcaggaaaataaaagttacatttacagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 tcagtagtgaggctctgagaaaacaattacatcaggaaaataaaagttacatttacagca 591
Query: 181 tttttgctctccttgattgctgtatacttaatttttctgtatactaattcaatatgaact 240
||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 590 tttttgctctccttgcttgctgtatacttaatttttctgtacactaattcaatatgaact 531
Query: 241 catcacatttagttataatactaatatattttcctgatcaaagtaaaattaagaataaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 catcacatttagttataatactaatatattttcctgatcaaagtaaaattaagaataaca 471
Query: 301 gaaaagaaaagatagaacatttacaaatatatggaaattaaaacacatgttaaaataatt 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaaaagaaaagatagagcatttacaaatatatggaaattaaaacacatgttaaaataatt 411
Query: 361 ataacgttgaatttttaagtgagaattaagaaa 393
|||||||||||||||||||||||||||||||||
Sbjct: 410 ataacgttgaatttttaagtgagaattaagaaa 378
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 793
Length adjustment: 9
Effective length of query: 384
Effective length of database: 784
Effective search space: 301056
Effective search space used: 301056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
