Query= MSMg01no442_l01.b1 MSMg01no442_l01.b1 CHROMAT_FILE:
MSMg01no442_l01.b1 PHD_FILE: MSMg01no442_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:58 2005
(358 letters)
>mm_chrX_80313033_80313790
Length = 758
Score = 630 bits (326), Expect = 0.0
Identities = 347/354 (98%)
Strand = Plus / Minus
Query: 5 gaattccttgtataccacaagcctacaatccattctgccatacagaaatattgaaaagta 64
|||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 558 gaattccttgtacaggacaagcctacaatccattctgccatacagaaacattgaaaagta 499
Query: 65 atacaaatatgtaaaattaagaagaataaactaggcaatttggttcacagtgcaatggag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 atacaaatatgtaaaattaagaagaataaactaggcaatttggttcacagtgcaatggag 439
Query: 125 gagttggtatcctgacctcgacatgtgtctgtctaaccttgtctcgtccttgcttgtatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gagttggtatcctgacctcgacatgtgtctgtctaaccttgtctcgtccttgcttgtatg 379
Query: 185 agcttcagcaccatctaagatggctgatgataaggcttgaaatgactactatggaaactc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 378 agcttcagcaccatctaagatggctgatgataaggcttgaaatgactactatggaaagtc 319
Query: 245 caaaataaacgtggtttcctgtgctggcttacagttcagtgtgggccatatttctcaaca 304
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 318 caaaataaacgtggtttcctgtgctgacttacagttcagtgtgggccatatttctcaaca 259
Query: 305 cctgaaatataggacaactagccacagatgtgtgggttcaaatccagctgtgca 358
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 258 cctgaaatataggacaactagccacagatgtgtgggttcaaatccagctttgca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_l01.g1 MSMg01no442_l01.g1 CHROMAT_FILE:
MSMg01no442_l01.g1 PHD_FILE: MSMg01no442_l01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:58 2005
(243 letters)
>mm_chrX_80151401_80152044
Length = 644
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%), Gaps = 1/244 (0%)
Strand = Plus / Plus
Query: 1 agacttagaggtcctcctgtctgcatgacaagtgcttcacttactgagttatcttctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacttagaggtcctcctgtctgcatgacaagtgcttcacttactgagttatcttctcag 260
Query: 61 cttgaataattttcttttgacagacgacgggagcacacttttagctgagaaatcagtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttgaataattttcttttgacagacgacgggagcacacttttagctgagaaatcagtttg 320
Query: 121 tatttaagtcaggattaatgtgtaatttatgattgatttaaaatataaatgttaagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttaagtcaggattaatgtgtaatttatgattgatttaaaatataaatgttaagctct 380
Query: 181 gacttatcctgaacagaatgaaaagattttgaacgatttttttt-aatcaaggtagatgc 239
| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 gtcttatcctgaacagaatgaaaagattttgaacgatttttttttaatcaaggtagatgc 440
Query: 240 tttg 243
||||
Sbjct: 441 tttg 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 644
Length adjustment: 9
Effective length of query: 234
Effective length of database: 635
Effective search space: 148590
Effective search space used: 148590
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
