Query= MSMg01no444_l04.b1 MSMg01no444_l04.b1 CHROMAT_FILE:
MSMg01no444_l04.b1 PHD_FILE: MSMg01no444_l04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:40 2005
(270 letters)
>mm_chrX_159917588_159918258
Length = 671
Score = 501 bits (259), Expect = e-146
Identities = 268/271 (98%), Gaps = 1/271 (0%)
Strand = Plus / Minus
Query: 1 gaattctttgaaagt-gcccccttgcagtgaataaagttagcattttataagagtgctgt 59
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gaattctttgaaagtggctcccttgcagtgaataaagttagcattttataagagtgctgt 412
Query: 60 gggaaaaatttgataattcatcctcctttgttttgaagagttgaatcttctgttaaaaga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gggaaaaatttgataattcatcctcctttgttttgaagagttgaatcttctgttaaaaga 352
Query: 120 cgatttaaaatttgaatgtgataaagtatgacaaactcactccagtcatgtgcaattttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cgatttaaaatttgaatgtgataaagtatgacaaactcactccagtcatgtgcaattttt 292
Query: 180 atctcacacttcaaatgctctttgccatgtaatcctttgttttttaaaatgtcattttct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atctcacacttcaaatgctctttgccatgtaatcctttgttttttaaaatgtcattttct 232
Query: 240 gctgctaagagcaattctctttcctgctgga 270
||||||||||| |||||||||||||||||||
Sbjct: 231 gctgctaagagtaattctctttcctgctgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no444_l04.g1 MSMg01no444_l04.g1 CHROMAT_FILE:
MSMg01no444_l04.g1 PHD_FILE: MSMg01no444_l04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:40 2005
(244 letters)
>mm_chrX_159764959_159765602
Length = 644
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 attctgctgtttcttttggttctctatcactgaggcacagcagtatctgtcagtccagga 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctgctgtttcttttggtcctctatcactgaggcacagcagtatctgtcagtccagga 260
Query: 61 atatccttttctccctttatactaagcttgccctcaatgagtttctgacagctaggggct 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatccttttctccctttataataagcttgccctcaatgagtttctgacagctaggggct 320
Query: 121 gggaaggagatattcaactacatcttgcctagaaggcacaataaaaaagagctttattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaaggagatattcaactacatcttgcctagaaggcacaataaaaaagagctttattgg 380
Query: 181 attttaagtaaggaagttctcagttgcatgatacacagatgtcacatcttgactagtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attttaagtaaggaagttctcagttgcatgatacacagatgtcacatcttgactagtgtg 440
Query: 241 gtg 243
|||
Sbjct: 441 gtg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
