ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATGCGCG
GAATTCCATTTCCTCCCAATGGAGACAATTTAAGAAAATGAAAAAGAGAA
AACATTTTAATTTGGATCAAAAGCAGATAATATAACCAATGATCCTAAAT
ACCATTTTCCTCAATCTTTAGCCATAACATTTGAAATAGATATTTTTTGA
CATTAAATAGACAAATAGTCAACCATATCCAGGATTGTATAAGGTAGGAA
ATATTGTAACAACATTGAAAAGATAAGTGAACAAGTATGATAAGACTTGT
TTCTTTATTAAAAGAGCTCATCTACAATTATGCAATATTTAAATTTGGTT
GGGACATACTAGATACATATTAGCAGAAAGTACAGGTAGAGACTAATTTC
ACACTACTTACATAATAACTACACATGAATGAAAGACATTAATATATATG
TTACAAAATATTATAATCATATAATATTACGTTATAAGATATTATATATG
AATATTTCAGAAGATGCATTTTTCTCTTCCCAGTGCTAAGAGTTGTTTAA
ACTCAGAGGTCTTTACCACTGAACTGGATCTTTACTCCTGCGGATCCGAG
ACTGGTTTTAAACGTATAATTTGCTTCCCGCCCTTGAAAATGTGGAAAAC
GTACCCATTTTTCTCTAAGAACAACATTTGTTCGCCGCTTTACCCCACTT
CCCCACGGTTACTCATGGAAATACAAAATTGGGTTTTATTAAATAATTTC
TCAATGGGACAAAAAN

NACAATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCAACGAAGGAATGTTGTATGGC
TGAGAAACATGTAATGAAATGTTCAAATTCCTTAGTCAACAAGGAAAAGG
AAATCCACAAAACTCTGAGGTTCTGTCTTACACCCATAAGAATGGATAAG
ATAACAAACACAAGAGATAGCACATGCTGGTGAGGATATGTACCAAGGGG
ATAAATTCTTCATTGCTGATGGGAATACAAACTTGTACAACCACTTTGGA
AATAAATTTGGTGGTTTCCCTTTTTTCCCAGAAACCCAGATATTCCACTC
TTGAGCCTATACCCAAAAGTTGCTCAAACATCCCGCAAAGACATTTATTC
AACTATGTTCACAACAGCTTTATTTATAAGAGTCAGAAACTGGAAACAAC
CTAGATGTCCCTCAAATAAAGTATGAATAAAGAAAATTGGCACATCTACA
CAATGGAACACTATCCAGCTATTAAAAACAAATACATCATGAATTTTTCA
GGCAGATAAATGGAACTTGAGAATATCATTCTGAGTGAGGTAACCCAGAC
CCCAAAGGACATGCTTTGCATGTACTCACTTATAAGCGGATATTTATAAT
TAAATAGAGGTTTTATTTGTAATTCCTTTCTTTTGTCCCCTAACTTTCAT
CTGAATCGTATTTTATTATTTCACCCCTAAGTCCCTGGTTCG

Query= MSMg01no444_l12.b1 MSMg01no444_l12.b1 CHROMAT_FILE:
MSMg01no444_l12.b1 PHD_FILE: MSMg01no444_l12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:12:42 2005
         (456 letters)



>mm_chrX_111538755_111539609
          Length = 855

 Score =  866 bits (448), Expect = 0.0
 Identities = 454/456 (99%), Gaps = 1/456 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caatttaagaaaatgaaaaagagaaaacattttaatttggatcaaaagcagataatataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatttaagaaaatgaaaaagagaaaacattttaatttggatcaaaagcagataatataa 260

                                                                       
Query: 61  ccaatgatcctaaataccattttcctcaatctttagccataacatttgaaatagatattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaatgatcctaaataccattttcctcaatctttagccataacatttgaaatagatattt 320

                                                                       
Query: 121 tttgacattaaatagacaaatagtcaaccatatccaggattgtataaggtaggaaatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgacattaaatagacaaatagtcaaccatatccaggattgtataaggtaggaaatatt 380

                                                                       
Query: 181 gtaacaacattgaaaagataagtgaacaagtatgataagacttgtttctttattaaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaacaacattgaaaagataagtgaacaagtatgataagacttgtttctttattaaaaga 440

                                                                       
Query: 241 gctcatctacaattatgcaatatttaaatttggttgggacatactagatacatattagca 300
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctca-caacaattatgcaatatttaaatttggttgggacatactagatacatattagca 499

                                                                       
Query: 301 gaaagtacaggtagagactaatttcacactacttacataataactacacatgaatgaaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaaagtacaggtagagactaatttcacactacttacataataactacacatgaatgaaag 559

                                                                       
Query: 361 acattaatatatatgttacaaaatattataatcatataatattacgttataagatattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 acattaatatatatgttacaaaatattataatcatataatattacgttataagatattat 619

                                               
Query: 421 atatgaatatttcagaagatgcatttttctcttccc 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 620 atatgaatatttcagaagatgcatttttctcttccc 655


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 855
Length adjustment: 10
Effective length of query: 446
Effective length of database: 845
Effective search space:   376870
Effective search space used:   376870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)