TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTATAATCCCATGGAAACGGAATAGTTCAATGTGCTCATCAGACC
TTAAAGAATTTGCCTTTTATGACAAAACAGTGGCAGTTATATCCCCCAAG
GTCACCAAAGGCGCATCTTGCCTTTACTTTATTTGATCTAAATTTTTTGC
AAACTGATATTAAAGGTCAGTCTGCAGCAGATCACCACTGGCATCCAGTT
ACTTCTAATTCTTATGCATTGATAAAATGAAAGGACACACTAACTAAGGA
ATGTAAGGGTCCAGATCCGATTCGAATCTGGGGAAGGAGCTCGGTTTGCG
TTTTTTCATGTGAAGATGGAGCACAGAGGCTGCCCAAGAGATTAATTTGT
TAGCTGAACACAGATCCTGAATCTTCTTATAAGTATCACTCTGAGAACTA
AAATTCCTCTTTTGCATAGAATTTAGTTGGGGACTCATCCTCCCAGAAAA
GCTGTTTTCTTGCTACTCTCAGAGCTTTGCAATTTGCAACTGAATAAAGT
ATCTGGACTTCCCCAAAAGAAGCTTTGCATTGCTACTTTCTCATTGTCTG
GGTCTCTTTTTCTTAAGCAGGTCAATCAACATCCTCCAATCAGACTGCAG
GGGGAGTGCATCCCTGCAAACAAAGGCTTAAGGTGGCAACTGCTATTTTC
ATTCTAAAGACATTCTACCATGCATTTTGGCTTTAGGTCTGATTTGAA

NCGATTGCAGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAAGAAGAAAGAACTTATGGCATAG
CACTGAGGCAATGGCACAAGGAAATAACTGGTTGATAGAAAGTGTCCCTG
AGTTTCTGAATGATGCAAGCCTTTATTGCTGCATAGCCAAAGGGAAACAG
AAATCCTTCACAAAAATCAAAGAGAGGAGCCAATAAACACCTTTCATCCA
GCAAGATCAAAAACTGCTCTTAGAAAACTGGCAAAGTGTACAAAACAGGC
AAAACAAGTTTCTGTGTCAGTAATGTAGGATCTTCACTTATAGCCTCAAT
TTTACACTTTCTCAGTGTACCAATTTCTATAAAACATGACCTTTCAAAGA
ATCAGCTTGACTAAGTGTTTAATAAACAATCCTGTGCAACTATATTCCAG
CTGCATCATTGGACATAAACTGAATTTTCCATGTGTTGCCACTGATGTGA
GCCATTATCCTGTTGTGCTTCAGGAGATTTATATGACCTTCAACAAGCAA
TCCAAATATGAAAATGAATAAGAACCCAACTTGCTAACTGTGACAGACAA
AACAATTCTTTAAGGCCACTAGTGCTACATTCAGGAGTCCAACTTTGTCT
GTGTTCTGAATCTAGTCAAAAACAGTTAAAATATTGGAAATAAAACTTGC
ATCTGTACTATAAATAGAATACTGTTTTTGCCCTTATTCTCTGAACAATA

Query= MSMg01no447_a14.g1 MSMg01no447_a14.g1 CHROMAT_FILE:
MSMg01no447_a14.g1 PHD_FILE: MSMg01no447_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:44 2005
         (548 letters)



>mm_chrX_140471523_140472472
          Length = 950

 Score =  429 bits (222), Expect = e-124
 Identities = 406/468 (86%), Gaps = 16/468 (3%)
 Strand = Plus / Minus

                                                                       
Query: 86  tgatgcaagcctttattgctgcatagccaaagggaaacagaaatccttcacaaaaatcaa 145
           ||||||||| ||| || ||||  |||||| |||||||||||||| |||||||||||||||
Sbjct: 746 tgatgcaaggcttcatggctgtgtagccagagggaaacagaaattcttcacaaaaatcaa 687

                                                                       
Query: 146 agagaggagcc-aataaacacctttcatccagcaagatcaaaaactgctcttagaaaact 204
           |||||| | || || |||| |||||||||||||||||||||||| | |||  ||||||||
Sbjct: 686 agagagcacccaaacaaacccctttcatccagcaagatcaaaaaattctcaaagaaaact 627

                                                                       
Query: 205 ggcaaagtgtacaaaacaggcaaaacaagtttctgtgtcagtaatgtaggatcttcactt 264
           ||||| |||| |  |||| ||||| ||||||||| ||||||||| |||||||||||||||
Sbjct: 626 ggcaaggtgtgc--aacaagcaaaccaagtttctctgtcagtaaagtaggatcttcactt 569

                                                                       
Query: 265 atagcctcaattttacactttctcagtgtaccaatttctat-aaaacatgacctttcaaa 323
           |||||||||||||||| ||||||| ||||||||||| || | |||||||||| |||||||
Sbjct: 568 atagcctcaattttactctttctcggtgtaccaattgctgtcaaaacatgacatttcaaa 509

                                                                       
Query: 324 gaatcagcttgactaagtg-ttt-aataaa-caatcctgtgcaactatattccagctgca 380
           |||||| |||| ||||| | ||| || ||| || |  |||||||||||||||||||||||
Sbjct: 508 gaatcaacttgtctaag-gatttcaa-aaatcattt-tgtgcaactatattccagctgca 452

                                                                       
Query: 381 tcattggacat-aaactgaattttccatgtgttgccactgatgtgagccattatcctgtt 439
           ||||||||| | ||| |||||   ||||||||||||||||||||||||  ||| ||||||
Sbjct: 451 tcattggac-tgaaagtgaatggcccatgtgttgccactgatgtgagctgttagcctgtt 393

                                                                       
Query: 440 gtg-cttcaggagatttatatgaccttc-aacaagcaatccaaatatgaaaatg-aataa 496
           ||| |||||||||| ||||||||||||| || |||||||| ||||||| ||||| |||| 
Sbjct: 392 gtggcttcaggagaattatatgaccttccaa-aagcaatctaaatatgtaaatgtaatag 334

                                                           
Query: 497 gaacccaacttgctaactgtgacagacaaaacaattctttaaggccac 544
           ||||||||| |||||||| ||||||||| | ||||| |||||||||||
Sbjct: 333 gaacccaacctgctaactttgacagacatagcaattgtttaaggccac 286


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 950
Length adjustment: 10
Effective length of query: 538
Effective length of database: 940
Effective search space:   505720
Effective search space used:   505720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)