NNGGCTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCTCATATTTCCAGGCAGAAACAGATTTTCTGGGAGACTCT
CAGGACTGATCGCAGAGATAAGCCTCAAGCTTCTTGACTCTCCTAGGATG
GGTGATTCCTTCTGAACTCATTCAACATTCTGCCTTTTAATTTCCTAAAG
AACATGATACTCTTTTTGCTTAATAGAGGCAGCTTTACCTTGTATCTCTA
TCTCTGTAACTCCTTGTGTTTTCCATTGTAAACATGGGCTTTTCACTGCC
TTTGTTCCCTAGTTTTATTTACTGTCTAATTCTAGAAACCTTAGAAGCAA
AATCAGTGTGGATCTTTACTGGCCCACTTACCTCTGGACTTCTCAAGTGA
GAGGGCAGTGGAGCATGAGAGATGGTTCAGTGGCTATGAGCCCATACTGC
TCTGACAGAAAACCCCAAGTCAGATTCAAAGAACCCAAGAAGGGTAGCTT
ATAATCCCCAGTAACTGGAGTGCCACAGTATCTAGCACCCTCTTCTGGCT
TCTGCCAGTAACTGCATCCATATGCATATACCCACACCAAGATATACGTG
ATTAANGATAAAATAAATCGTTAAAAAAGACTGAGAACAAGGGTGCAAAA
GGTGTATCCTGTGTTTGGAAGTAAACACAAAGCTTTCTTGGAATGGGAAA
ATCACTTTCCTTATTTGACCAAAAATGATAATN

TTTCTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCACTAAACCCATCTGGA
AATCCCTGTTTGTTGGTCTGGTTGACTTCTTGGTATGTGCCTCTTTTGTC
CCTGAGTTGCTTCAGGTCTCCTGGTAGGCCTGCAACCTTGGCTGTAGTAG
ATCACCTTTGGGGCTTTCCAACTGGAAGTTCTTCACAGTGACTGAAAAGC
TGTTGATCTTTTGCCCTGGCTGCATTAGATCTCCTGGGAGGTCTTCAGAC
TGTTGGGTCTTCAGAGAAGCTGTCTTTTTATTGTCCAACTGCTTGGAATG
CAGTGGATCCTCAACTACCCTGAGTGTAGTGGGTTCCTCTAGGATAGGTC
AGGATATGGTGTATTCACTGGAGCATACCAGCTAAGAGTCTACTGCATCA
GAAAGGACTGGTTATAATGTTCATAACGTACCTAATGTTAGTGGCTGTTT
TTTATTTCTCATTTTTTCTTTCCTTTTTTTTACTCTTTTTTTCCTTTCCC
TTTCTCTTCTCCTCTTTTTTTTTCATTTTCTCCTTCTTTATTCCTACTTT
CCCATCTCCATCTCTTCTTCTTCTCTTCCTCTTTTATTAATCCTTTTTTC
ATATCTCCTTTTCTATATTTCCTTTCAATTCTATTTTTTTAACATATTAC
TACTTTACTTACCCTCTACCCCTTTTTTTACTTCTATTTTCTATCCCTCC
CTTCTACTTTCTTCCTTCTTCTTTCCTGCTCCTTTCTCTTTTT

Query= MSMg01no447_m08.b1 MSMg01no447_m08.b1 CHROMAT_FILE:
MSMg01no447_m08.b1 PHD_FILE: MSMg01no447_m08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:47 2005
         (503 letters)



>mm_chrX_88488220_88489122
          Length = 903

 Score =  957 bits (495), Expect = 0.0
 Identities = 498/499 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcatatttccaggcagaaacagattttctgggagactctcaggactgatcgca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaattcctcatatttccaggcagaaacagattttctgggagactctcaggactgatcgca 500

                                                                       
Query: 65  gagataagcctcaagcttcttgactctcctaggatgggtgattccttctgaactcattca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gagataagcctcaagcttcttgactctcctaggatgggtgattccttctgaactcattca 440

                                                                       
Query: 125 acattctgccttttaatttcctaaagaacatgatactctttttgcttaatagaggcagct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acattctgccttttaatttcctaaagaacatgatactctttttgcttaatagaggcagct 380

                                                                       
Query: 185 ttaccttgtatctctatctctgtaactccttgtgttttccattgtaaacatgggcttttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttaccttgtatctctatctctgtaactccttgtgttttccattgtaaacatgggcttttc 320

                                                                       
Query: 245 actgcctttgttccctagttttatttactgtctaattctagaaaccttagaagcaaaatc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 actgcctttgttccctagttttatttactgtctaattctagaaaccttagaagcaaaatc 260

                                                                       
Query: 305 agtgtggatctttactggcccacttacctctggacttctcaagtgagagggcagtggagc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agtgtggatctttactggcccacttacctctggacttctcaagtgagagggcagtggagc 200

                                                                       
Query: 365 atgagagatggttcagtggctatgagcccatactgctctgacagaaaaccccaagtcaga 424
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 199 atgagagatggttcagtggctatgagcccatactgctgtgacagaaaaccccaagtcaga 140

                                                                       
Query: 425 ttcaaagaacccaagaagggtagcttataatccccagtaactggagtgccacagtatcta 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ttcaaagaacccaagaagggtagcttataatccccagtaactggagtgccacagtatcta 80

                              
Query: 485 gcaccctcttctggcttct 503
           |||||||||||||||||||
Sbjct: 79  gcaccctcttctggcttct 61


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)