Query= MSMg01no448_j11.b1 MSMg01no448_j11.b1 CHROMAT_FILE:
MSMg01no448_j11.b1 PHD_FILE: MSMg01no448_j11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:55 2005
(288 letters)
>mm_chrX_158562196_158562884
Length = 689
Score = 478 bits (247), Expect = e-139
Identities = 277/287 (96%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 tgaagagagag-aaggaacaaatattccacaagctggagatgtttgggttatgatcagga 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tgaagagagagtaaggaacaaatattccacaagctggagatgtttgggttatgatcagga 428
Query: 60 tattgtaataatcaatttttctagactttgaaacagagtcttcattctttcctctctcca 119
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 427 tattgtaataatcagtttttctagactttgaaacagagtcttcgttctttcctctctcca 368
Query: 120 caagtggaaaagctgataagtgtagcatttctgccttttgttgctgtttgcatgattttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 367 caagtggaaaagctgataagtgtagcatttctgccttttgttgctgtttgcatgagcttg 308
Query: 180 ctcttggcacaagagggtttcaggcacataagtaacaaaacaaaggatttttacctctta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ctcttggcacaagagggtttcaggcacataagtaacaaaacaaaggatttttacctctta 248
Query: 240 gtatttataattgacatgcaacaactttctgtattttctaaccaata 286
| | || |||||||||| ||||||||||||||||||||||||||||
Sbjct: 247 ggaagtaaaattgacatgtaacaactttctgtattttctaaccaata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_j11.g1 MSMg01no448_j11.g1 CHROMAT_FILE:
MSMg01no448_j11.g1 PHD_FILE: MSMg01no448_j11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:55 2005
(241 letters)
>mm_chrX_158385788_158386428
Length = 641
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Plus
Query: 1 agtcttaatgacagtagcatcaaagcattgctttggaggagtaagctcgctcagtctcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcttaatgacagtagcatcaaagcattgctttggaggagtaagctcgctcagtctcca 260
Query: 61 ttttaaccacctaagaccaactcaaacacataaataattagtctgcctcaaaaaacacac 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaaccacctaagaccaactcaaacgcataaataattagtctgcctcaaaaaacacac 320
Query: 121 tgaaactagtgcagggtatgaggtagctagtatgggtaactattggtaaagagtattctt 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 tgaaactagagcagggtatgaggtagctagtatgggtaactattggtaaagagtacactt 380
Query: 181 atcatagacaactcccagagttttattccttgcactaaaaaccaaacatataaatcaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcatagacaactcccagagttttattccttgcactaaaaaccaaacatataaatcaatc 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
