Query= MSMg01no449_c22.b1 MSMg01no449_c22.b1 CHROMAT_FILE:
MSMg01no449_c22.b1 PHD_FILE: MSMg01no449_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:43 2005
(617 letters)
>mm_chrX_80159956_80160972
Length = 1017
Score = 1029 bits (532), Expect = 0.0
Identities = 568/580 (97%), Gaps = 3/580 (0%)
Strand = Plus / Minus
Query: 5 gaattcacttcaaggtcc-atgcttacggaaaaacatatattttagaactttgataactg 63
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gaattcacttcaagg-cctatgcttacggaaaaacatatattttagaactttgataactg 523
Query: 64 tctgcccttcgtttcattttagctaatctatatgctatagcagttaaaatattgtagatc 123
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 522 tctgcccttcgtttcattttagcgaatctatatgctatagcagttaaaatattgtagatc 463
Query: 124 acaataaaaatatgtattaatgaaaacagatgaatatacatatgtacatacatatataat 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acaataaaaatatgtattcatgaaaacagatgaatatacatatgtacatacatatataat 403
Query: 184 tttatggcaagtgtgttacatgagacatctgtaagaaagatggaatccagtatgttaaaa 243
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 402 tttatggcaagtgtgttacatgagacatctataagaaagatggaatccagtatgttaaaa 343
Query: 244 attgcaatcttagaacattttagatatttcttatactttcataaatcatcaactactact 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 342 attgcaatcttagaacattttagatttttcttatactttcataaatcatcaactactact 283
Query: 304 acaatgtaagaatgtgaaatgttaaagtatgaaaactgaatttcagtcattttctattca 363
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||
Sbjct: 282 acaatgtaagaatgtgaaatattaaggtatgaaaactgaatttcagtcattttctactca 223
Query: 364 aagtaacaactgagaatc-tttttttgaatatttcttattagatattttctttatatacc 422
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aagtaacaactgagaatcttttttttgaatatttcttattagatattttctttatatacc 163
Query: 423 tttcaaatgctatcccaaaagttccctataccctcccctccccaccgacaactgagaatc 482
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 162 tttcaaatgctatcccaaaagttccctataccctcccctccccactgacaactgagaatc 103
Query: 483 ttaaatgattcgctcatgtttaactcttattcttttaatcattatacttataaaacttac 542
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ttaaatgatttgctcatgtttaactcttattcttttaatcattatacttataaaacttac 43
Query: 543 cagttgatatttaaacaatttccataattaagtatgaggc 582
||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 cagttgatatttaaacaatttccataattaagtatgaggc 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no449_c22.g1 MSMg01no449_c22.g1 CHROMAT_FILE:
MSMg01no449_c22.g1 PHD_FILE: MSMg01no449_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:43 2005
(473 letters)
>mm_chrX_80022100_80022971
Length = 872
Score = 891 bits (461), Expect = 0.0
Identities = 470/473 (99%), Gaps = 1/473 (0%)
Strand = Plus / Plus
Query: 1 actgtaagaggtacatcttctttacccatataatgaatcataattccactctgctctttg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 actgtaagaggtacatcttctttacccatataatgaatcataattccactctgctcttag 260
Query: 61 ttcacccaaacctgtctacagttttcatcattctttgacagaatgataagcctcccacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcacccaaacctgtctacagttttcatcattctttgacagaatgataagcctcccacac 320
Query: 121 aggaactccttacctcagactgtattatttttgtctaatttttaattataagggagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggaactccttacctcagactgtattatttttgtctaatttttaattataagggagtttg 380
Query: 181 aaatttacttttatcttttgcatacctatccttaaggtacatatttcttactcaaggttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaatttacttttatcttttgcatacctatccttaaggtacatatttcttactcaaggttg 440
Query: 241 ccaggcttaaatattctgatctgcattatgcataacttgaaaataatataatttgggttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaggcttaaatattctgatctgcattatgcataacttgaaaataatataatttgggttt 500
Query: 301 taggatttttccctttataggtttaaatctattttcataatttaggaaccaagttgggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taggatttttccctttataggtttaaatctattttcataatttaggaaccaagttgggtt 560
Query: 361 tgttgtgcaacactaattcaatgagtgcagagatcatagtagagataaaaaataacaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 tgttgtgcaacactaattcaatgagtgcagagatcatagtagagataaaaa-taacaaca 619
Query: 421 tagaactaggcaggcagtcagacagacagatagatagaggaaggaaaaatggg 473
|||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 620 tagaactaggcaggcagtcagaaagacagatagatagaggaaggaaaaatggg 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 872
Length adjustment: 10
Effective length of query: 463
Effective length of database: 862
Effective search space: 399106
Effective search space used: 399106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
