TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACTCCTATTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATGGGC
AAGCAACGAATCGGGAGCTGTCACGCCATATCAGGTGCTGAAACGTCACG
CTGCGGGTTATAAAAGCAGCGCCATTTTCCTGGTTTGGGATCTTCCTGAG
AAGCAAGCAATAAAGCTTTTGCCGCAGAAGATTCTGGTTTGTTGCGTCTT
TCTTGCCGGTCGAGCGGGACGCAATAACTTTGTTCATACATTGATGGACA
TGTGTATTGACTTATTTCATGTGTATAGTGTATTTTACTGCAATAAATAT
GGGATAAGGATTTATTTTAAATATACTTATTTAATTTCAATTGGATATAT
GTATATATATATTATATATATAATATATATAGTCAGCAATATTGCTTGCT
CATTTGGTAATTCTAGTTTTAATTTTTCTGAAGATGATTAAGCAAAGTAT
AAGTATGCATACTGACTGTCTTAGGGTTTCTATTGCTGTGAAAAGATTTC
ATGGCTACAACTACTCTTATAAAGAAAAACATCGCATTGGGGCTGGATTA
CAGGTTTAGAGGTTTAGTCCCTTATTCTCATGCTAGTTTGAATGAAAATG
GCCCTCATATGTTACAGGGACTGTCACTCTTACAAAATGTGGCCCTGCAA
GAGCAGGCATGTCCTTGCTGTATAACACATGTTTCGGTCAGCTGGCTTTG
ACGCTTCAAAN

NCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTATGCAAGCTGGGATAACTGAACACA
TTTTGAAGACATTTGTAAAAGTCATTTGCATACCTTTTTGTTGCCTTTTG
ACCCCTAAAAAATTGATTTTCTGCCATCACGTAATCTACTTGATGGGTTT
TTGCTACCTCCGTGTGAGTACTTGTATTTCAAGTTTTCACAGCTGTATTT
GGCATTACATGGCCAGCTTTTGTGGAATGTTTGCTGTCAGACTGATGCTG
TGTGGTAGCAAGAACAGGTTTAGGAATGTTTAACACTGATGACCTGAAAA
GGGGTCAAGCTGCTGTTTGCTTGGTGCTGGTTGGGAGACTGAAATCTCTT
GCTGGTTTTAAAAGAGAGCTAGAGAAACTAGATTTAAACATTGATCTCAT
TCATATAACTGGAATGGGCTTTGATTTATCAGTAATCAGTGAAGCCAGTT
GCAGTTTGAGTTCATTACAAAAATAATAAATAATATCCATAAGATGTTCC
AACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTA
TAATTGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCCACAGAGGAATGG
ATACCGAAAATGTGGGACATTTTCACCAAATGAGGACTACTTAACTATTA
AAAAAAGGATTTTTTGAAATCCCACGCAAATGGATGGACCTGGAGGGCTC
CTTCTGAGTGGGGAACCCCACCCCAAAAAAA

Query= MSMg01no450_n19.g1 MSMg01no450_n19.g1 CHROMAT_FILE:
MSMg01no450_n19.g1 PHD_FILE: MSMg01no450_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:55 2005
         (470 letters)



>mm_chrX_155366903_155367772
          Length = 870

 Score =  893 bits (462), Expect = 0.0
 Identities = 468/470 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctatgcaagctgggataactgaacacattttgaagacatttgtaaaagtcatttgcatac 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatgcaagcttggataactgaacacattttgaagacatttgtaaaagtcatttgcatac 260

                                                                       
Query: 61  ctttttgttgccttttgacccctaaaaaattgattttctgccatcacgtaatctacttga 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttcgttgccttttgacccctaaaaaattgattttctgccatcacgtaatctacttga 320

                                                                       
Query: 121 tgggtttttgctacctccgtgtgagtacttgtatttcaagttttcacagctgtatttggc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggtttttgctacctccgtgtgagtacttgtatttcaagttttcacagctgtatttggc 380

                                                                       
Query: 181 attacatggccagcttttgtggaatgtttgctgtcagactgatgctgtgtggtagcaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attacatggccagcttttgtggaatgtttgctgtcagactgatgctgtgtggtagcaaga 440

                                                                       
Query: 241 acaggtttaggaatgtttaacactgatgacctgaaaaggggtcaagctgctgtttgcttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggtttaggaatgtttaacactgatgacctgaaaaggggtcaagctgctgtttgcttg 500

                                                                       
Query: 301 gtgctggttgggagactgaaatctcttgctggttttaaaagagagctagagaaactagat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtgctggttgggagactgaaatctcttgctggttttaaaagagagctagagaaactagat 560

                                                                       
Query: 361 ttaaacattgatctcattcatataactggaatgggctttgatttatcagtaatcagtgaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttaaacattgatctcattcatataactggaatgggctttgatttatcagtaatcagtgaa 620

                                                             
Query: 421 gccagttgcagtttgagttcattacaaaaataataaataatatccataag 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gccagttgcagtttgagttcattacaaaaataataaataatatccataag 670


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space:   395600
Effective search space used:   395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)