Query= MSMg01no456_o10.b1 MSMg01no456_o10.b1 CHROMAT_FILE:
MSMg01no456_o10.b1 PHD_FILE: MSMg01no456_o10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:53 2005
(340 letters)
>mm_chrX_106432783_106433522
Length = 740
Score = 582 bits (301), Expect = e-170
Identities = 330/345 (95%), Gaps = 10/345 (2%)
Strand = Plus / Minus
Query: 1 atcagagcttccattatttctttattttgtattttttcatgatatatctttagctttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atcagagcttccattatttctttattttgtattttttcatgatatatctttagctttgtt 481
Query: 61 gaaacattatatgaatttactttaattttaaactaaatttttttagaagtgctcattata 120
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 480 gaaacattatatgaatttactttaatttcaaactaaattttattagaagtgctcattata 421
Query: 121 gaaattataggttgaagataagattattcataaaaataagaatggaattgttggtcaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gaaattataggttgaagataagattattcataaaaataagaatggaattgttggtcaaaa 361
Query: 181 taagtcaagctttataaaacaaaggcaaactcttaccctagatatttttgtctacatttt 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 360 taagtcaagctttataaaacaagggcaaactcttaccctagatatttttgtctaca---- 305
Query: 241 tttt-----tatggctttctatattcatcagatcttgcatttttaaatcaataacacaca 295
||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 -tttaaaactatggctttctatattcatcagatcttgcatttttaaatcaataacacaca 246
Query: 296 ctgagttttatgtattggtgataacaacggcatattactggtgac 340
|||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 245 ctgaattttatgtattggtgataacaacggtatattactggtgac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no456_o10.g1 MSMg01no456_o10.g1 CHROMAT_FILE:
MSMg01no456_o10.g1 PHD_FILE: MSMg01no456_o10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:28:53 2005
(318 letters)
>mm_chrX_106247569_106248286
Length = 718
Score = 576 bits (298), Expect = e-169
Identities = 313/318 (98%)
Strand = Plus / Plus
Query: 1 atagttcacagggaaaaaagtatatattgctcatacatataaaaatgttcaatttcagtt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 atagttcacagggaaaaaagtatatatttctcatacatataaaaatgttcaatttcagtt 260
Query: 61 gtaatgaaatacatactagaccacaataagggagctttcagcacttaccttcagaacacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtaatgaaatacatactagaccacaataagggagctttcagcacttaccttcagaacacg 320
Query: 121 cgtacccatgtaatttggcagtattttaaaaaaatactgatttttttctttgattaaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtacccatgtaatttggcagtattttaaaaaaatactgatttttttctttgattaaaca 380
Query: 181 attacactgaaaatttacatctatagagataccttatatatgaattcaaaactatttgtt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attacactgaaaatttacatctatagagataccttatatatgaattcaaaactatttgtg 440
Query: 241 tttgtattgaagcagcaaaacattggaactataacttgcttcttggcttattcttcaaag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgtattgaagcagtaaaacattggaactataacttgcttcttggcttattcttcaaag 500
Query: 301 aatgaatgtatttaataa 318
||||||||||||||||||
Sbjct: 501 aatgaatgtatttaataa 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
