Query= MSMg01no457_f19.b1 MSMg01no457_f19.b1 CHROMAT_FILE:
MSMg01no457_f19.b1 PHD_FILE: MSMg01no457_f19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:32 2005
(409 letters)
>mm_chrX_80376711_80377519
Length = 809
Score = 760 bits (393), Expect = 0.0
Identities = 405/409 (99%)
Strand = Plus / Minus
Query: 1 atgccaagtatacatgatggcttatctgctattccagtgctgggtggtatagaaagtgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 609 atgccaagtatacatgatggcttatctgctattccagtgctgggtggtagagaaagtgaa 550
Query: 61 ttcctagaggaaccggcatatttagacaagccatgtaaatgagctctggttttaactgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 ttcctagaggaaccggcatatttagacaagccatgtaaatgagctctggttttaactgag 490
Query: 121 aggccttacttgaatggtaaagatagagaatgattgaagaaaactctagatttcaacttc 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aggccttacttgaatggcaaagatagagaatgattgaagaaaactctagatttcaacttc 430
Query: 181 tggactccatgtgaacatgcacattcatacaaatatgtccccacatgcaaagatataaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tggactccatgtgaacatgcacattcatacaaatatgtccccacatgcaaagatataaaa 370
Query: 241 cagaaactttgactatatttccttctagctttcagaattgtaaagtaatgatagatgtcc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 369 cagaaactttgacaatatttccttctagctttcagaattgtaaagtaatgatagacgtcc 310
Query: 301 ttatataaaacagtgctttaagtcatcatgctcatattgacctatagcttagtacacaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttatataaaacagtgctttaagtcatcatgctcatattgacctatagcttagtacacaat 250
Query: 361 gatcaaggttccttgcctctgtttcatcccataatcttcctacttatgt 409
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gatcaaggttccttgcctctgtttcatcccataatcttcctacttatgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_f19.g1 MSMg01no457_f19.g1 CHROMAT_FILE:
MSMg01no457_f19.g1 PHD_FILE: MSMg01no457_f19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:32 2005
(381 letters)
>mm_chrX_80202418_80203198
Length = 781
Score = 648 bits (335), Expect = 0.0
Identities = 364/381 (95%), Gaps = 12/381 (3%)
Strand = Plus / Plus
Query: 1 attctggtggatttaaatatatgaaccatggaatagactagagaaacttgaaagtccact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attctggtggatttaaatatatgaaccatggaatagactagagaaacttgaaagtccact 260
Query: 61 aaatgtaaagagaaggagatcaggaattcaataagaggacaaagccaagtgtgtacctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgtaaagagaaggagatcaggaattcaataagaggacaaagccaagtgtgtacctgc 320
Query: 121 tcctgtatacatgggacacacacacatgcacacacacacacacacacacacacacacaca 180
|||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 tcctgtatacatgggacacacacacatg------------cacacacacacacacacaca 368
Query: 181 cacacacacacacacacacacacacacacacattgtccagacacactggtacaaccagaa 240
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 369 cacacacacacacacacacacacacacacacatcgtccagacacactggtacaactagaa 428
Query: 241 gcaaggtgactagtttatgaaccaggctgtcccttttaatctccaatgtaagggctttgt 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 429 gcaaggtgacaagtttatgaaccaggctgtcccttttaatctccaatgtaaggactttgt 488
Query: 301 gaatgaggtgctcacttgtacacttggccctctgctttccacaggctatgccatctattt 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 489 gaatgaggtgctcacttgtacactcggccctctgctttccacaggctatgccatctattt 548
Query: 361 acctctaatttcctttccacg 381
|||||||||||||||||||||
Sbjct: 549 acctctaatttcctttccacg 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 106
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
