Query= MSMg01no457_f20.b1 MSMg01no457_f20.b1 CHROMAT_FILE:
MSMg01no457_f20.b1 PHD_FILE: MSMg01no457_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:32 2005
(304 letters)
>mm_chrX_163527715_163528418
Length = 704
Score = 534 bits (276), Expect = e-156
Identities = 293/300 (97%), Gaps = 3/300 (1%)
Strand = Plus / Minus
Query: 5 gaattcttgattttcacgaagttgattttcctttgagatgacctaatcggggctttaaat 64
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 312 gaattcttgatttttacgaagttgattttcctttgagatgacctaattggggctttaaaa 253
Query: 65 aaaactggcattaattaattaattgtgtgtgctgttgttgaaccccagcagtgtgcttat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaaactggcattaattaattaattgtgtgtgctgttgttgaaccccagcagtgtgcttat 193
Query: 125 agagaacagaggacaacttgagttggttcgctctttctactgtatgggtcctggggattg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agagaacagaggacaacttgagttggttcgctctttctactgtatgggtcctggggattg 133
Query: 185 aactcaaattatgaggtttgcttacacatcttgctgatccagtctcatagatcttgaagt 244
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 aactcaaatcatgaggtttgcttacacatcttgctgatccagtctcatagatcttgaagt 73
Query: 245 gctcatgcagtcaagcaagaagaagaagaatatgaagaagaagaagaagaagaagaagaa 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 72 gctcatgcagtcaagcaagaagaagaagaa---gaagaagaagaagaagaagaagaagaa 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 304
Length of database: 704
Length adjustment: 9
Effective length of query: 295
Effective length of database: 695
Effective search space: 205025
Effective search space used: 205025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_f20.g1 MSMg01no457_f20.g1 CHROMAT_FILE:
MSMg01no457_f20.g1 PHD_FILE: MSMg01no457_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:32 2005
(249 letters)
>mm_chrX_163336678_163337326
Length = 649
Score = 464 bits (240), Expect = e-135
Identities = 243/244 (99%)
Strand = Plus / Plus
Query: 1 acaggtactctgagagttctggagagcctcagggagagtgcagtgtaattttaataacaa 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 acaggtactctgagagttctggagagccacagggagagtgcagtgtaattttaataacaa 260
Query: 61 tattaagtcacaagggagttaagaggcgtatgtgcctgacagaaaacaagaaaagcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattaagtcacaagggagttaagaggcgtatgtgcctgacagaaaacaagaaaagcattc 320
Query: 121 ttgtttgtgatattctcagaacatttatacctggggaagaagtaaagctaaaatcaaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtttgtgatattctcagaacatttatacctggggaagaagtaaagctaaaatcaaagg 380
Query: 181 tcatacgcaccttggttccttgttattttaacattttctcgtgtgtgtgtgtgtgtgtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatacgcaccttggttccttgttattttaacattttctcgtgtgtgtgtgtgtgtgtgt 440
Query: 241 gtgt 244
||||
Sbjct: 441 gtgt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
